RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 UBIAD1Q9Y5Z9 338 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 PFASO15067 1338 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 WDR46O15213 610 aaKnown RBP13.79□□□□□ -0.2
USP11-204ENST00000377107 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 CD19P15391 556 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 HSD17B4P51659 736 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 NLRP11P59045 1033 aaKnown RBP13.79□□□□□ -0.2
USP11-204ENST00000377107 ALCAMQ13740 583 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 ZBTB41Q5SVQ8 909 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 ACAD10Q6JQN1 1059 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 OLIG1Q8TAK6 271 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 SHC3Q92529 594 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 FGFR1OP2Q9NVK5 253 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 NENFQ9UMX5 172 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 PCNTO95613 3336 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 ADGRA3Q8IWK6 1321 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 RPTORQ8N122 1335 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 TCP11X1B4DZS4 312 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 RIPK2O43353 540 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 KRT19P08727 400 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 RFX1P22670 979 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 CCND2P30279 289 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 PTGIRP43119 386 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 JAK3P52333 1124 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 CYP24A1Q07973 514 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 TMED2Q15363 201 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 CCDC60Q8IWA6 550 aaPredicted RBP13.79□□□□□ -0.2
USP11-204ENST00000377107 HELQQ8TDG4 1101 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 OSBPL7Q9BZF2 842 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 EFCC1Q9HA90 598 aa13.79□□□□□ -0.2
USP11-204ENST00000377107 DNM1LO00429 736 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 SPAG7O75391 227 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 ZBTB48P10074 688 aaPredicted RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 PEX5P50542 639 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 FKBP1AP62942 108 aaKnown RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 LIN9Q5TKA1 542 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 C11orf63Q6NUN7 778 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 TAOK1Q7L7X3 1001 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 RTKN2Q8IZC4 609 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 VPS37BQ9H9H4 285 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 SLC40A1Q9NP59 571 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 AGO2Q9UKV8 859 aaKnown RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 TLR3O15455 904 aaKnown RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 ZBTB7AO95365 584 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 HSPA6P17066 643 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 GNA15P30679 374 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 STX2P32856 288 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 ORC1Q13415 861 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 SLMAPQ14BN4 828 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 C4orf19Q8IY42 314 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 ANKRD35Q8N283 1001 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 C7orf43Q8WVR3 580 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 CNOT10Q9H9A5 744 aaKnown RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 SLC38A10Q9HBR0 1119 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 JPH1Q9HDC5 661 aaPredicted RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 KLC4Q9NSK0 619 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 NXF1Q9UBU9 619 aaKnown RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 TMEM120BA0PK00 339 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 ZSCAN5DPP0CG00 497 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 SPATS2Q86XZ4 545 aaKnown RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 IMPG2Q9BZV3 1241 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
USP11-204ENST00000377107 PCDHA3Q9Y5H8 950 aa13.78□□□□□ -0.2
USP11-204ENST00000377107 GZMAP12544 262 aa13.77□□□□□ -0.2
USP11-204ENST00000377107 BRAFP15056 766 aa13.77□□□□□ -0.2
USP11-204ENST00000377107 KCNV1Q6PIU1 500 aa13.77□□□□□ -0.2
USP11-204ENST00000377107 HERPUD2Q9BSE4 406 aa13.77□□□□□ -0.2
USP11-204ENST00000377107 DEFB129Q9H1M3 183 aa13.77□□□□□ -0.2
USP11-204ENST00000377107 PLSCR1O15162 318 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 PSAPP07602 524 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 KRT15P19012 456 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 ACTR2P61160 394 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 TFAMQ00059 246 aaKnown RBP13.77□□□□□ -0.21
USP11-204ENST00000377107 SLC20A2Q08357 652 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 SLC39A4Q6P5W5 647 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 PAGR1Q9BTK6 254 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 ATP6V0A4Q9HBG4 840 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 HOMER3Q9NSC5 361 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 SLC9A2Q9UBY0 812 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 FBXO40Q9UH90 709 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 NEFHP12036 1026 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 CETN2P41208 172 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 DLK2Q6UY11 383 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 DEFB132Q7Z7B7 95 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 SYNCQ9H7C4 482 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 UMODL1Q5DID0 1318 aa13.77□□□□□ -0.21
USP11-204ENST00000377107 SLX4Q8IY92 1834 aa13.76□□□□□ -0.21
USP11-204ENST00000377107 PIK3R2O00459 728 aa13.76□□□□□ -0.21
USP11-204ENST00000377107 VWA5AO00534 786 aa13.76□□□□□ -0.21
USP11-204ENST00000377107 WEE2P0C1S8 567 aa13.76□□□□□ -0.21
USP11-204ENST00000377107 ETS1P14921 441 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms