RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 FAM114A2Q9NRY5 505 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 TXNDC16Q9P2K2 825 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 TRAF3IP3Q9Y228 551 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 FOXO6A8MYZ6 492 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 BPIFB4P59827 614 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 ERVK-9P63128 1117 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 SLC5A5Q92911 643 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 NMRK2Q9NPI5 230 aa11.86□□□□□ -0.51
HDAC6-203ENST00000376619 MYL6P60660 151 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 ZBTB41Q5SVQ8 909 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 FAM102AQ5T9C2 384 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-203ENST00000376619 DARS2Q6PI48 645 aaKnown RBP11.85□□□□□ -0.51
HDAC6-203ENST00000376619 JAMLQ86YT9 394 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 EDEM3Q9BZQ6 932 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 RNF14Q9UBS8 474 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 EXOC1LA0A1B0GW35 172 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 RGL2O15211 777 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 PYGMP11217 842 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 PMS2P54278 862 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 CCDC6Q16204 474 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 GKAP1Q5VSY0 366 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-203ENST00000376619 HGSNATQ68CP4 663 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 GPAT2Q6NUI2 795 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 KDELC2Q7Z4H8 507 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 IRF2BP2Q7Z5L9 587 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 APOBEC3FQ8IUX4 373 aaKnown RBP11.85□□□□□ -0.51
HDAC6-203ENST00000376619 LNX1Q8TBB1 728 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-203ENST00000376619 WHAMMQ8TF30 809 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 LENG9Q96B70 501 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-203ENST00000376619 FAM169AQ9Y6X4 670 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 RTN2O75298 545 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 HSD17B3P37058 310 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 IRAK1P51617 712 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 DUOXA2Q1HG44 320 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 FIGNQ5HY92 759 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 TREML2Q5T2D2 321 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 SLC38A10Q9HBR0 1119 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 OLFML3Q9NRN5 406 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 HES2Q9Y543 173 aa11.85□□□□□ -0.51
HDAC6-203ENST00000376619 GCLCP48506 637 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 GPC3P51654 580 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 FSTL1Q12841 308 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 VGLL4Q14135 290 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 NEDD9Q14511 834 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 HADHQ16836 314 aaKnown RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 TWF2Q6IBS0 349 aaKnown RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 KIF12Q96FN5 646 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 IQCA1LA6NCM1 817 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 CCDC188H7C350 402 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 SLC16A3O15427 465 aaKnown RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 OSBPP22059 807 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 TNFSF9P41273 254 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 AMPD2Q01433 879 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 DRP2Q13474 957 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 TMEM35BQ8NCS4 154 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 SEMA4AQ9H3S1 761 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 LCMT1Q9UIC8 334 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 UBE4BO95155 1302 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 PKD1L3Q7Z443 1732 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 IGLV3-22A0A075B6J6 115 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 FRMD3A2A2Y4 597 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 OPLAHO14841 1288 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 MYL3P08590 195 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 CA4P22748 312 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 POLR2BP30876 1174 aaKnown RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 NUP98P52948 1817 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 CACNB2Q08289 660 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 MEI1Q5TIA1 1274 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 ZBED8Q8IZ13 594 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 C4orf33Q8N1A6 199 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 PARD3BQ8TEW8 1205 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 BSNDQ8WZ55 320 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 SEMA4DQ92854 862 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 CFAP36Q96G28 342 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 ATXN7L3BQ96GX2 97 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 GANQ9H2C0 597 aa11.84□□□□□ -0.51
HDAC6-203ENST00000376619 MRPL47Q9HD33 250 aaKnown RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 PIH1D1Q9NWS0 290 aaKnown RBP11.84□□□□□ -0.51
HDAC6-203ENST00000376619 NHSQ6T4R5 1651 aa11.83□□□□□ -0.51
HDAC6-203ENST00000376619 IGSF9BQ9UPX0 1349 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 ITGB3P05106 788 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 CXCL8P10145 99 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 FLT3P36888 993 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 HIRAP54198 1017 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-203ENST00000376619 TFDP1Q14186 410 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 PRAMEF19Q5SWL8 479 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 DCLK2Q8N568 766 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 KIAA1683Q9H0B3 1180 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 NSRP1Q9H0G5 558 aaKnown RBP11.83□□□□□ -0.52
HDAC6-203ENST00000376619 RANBP17Q9H2T7 1088 aaKnown RBP11.83□□□□□ -0.52
HDAC6-203ENST00000376619 GPATCH2LQ9NWQ4 482 aa11.83□□□□□ -0.52
HDAC6-203ENST00000376619 CICQ96RK0 1608 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-203ENST00000376619 EIF3DO15371 548 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms