RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 PARM1Q6UWI2 310 aa25.48■■□□□ 1.67
C9orf47-202ENST00000375850 RSPO2Q6UXX9 243 aaPredicted RBP25.48■■□□□ 1.67
C9orf47-202ENST00000375850 C4orf32Q8N8J7 132 aa25.48■■□□□ 1.67
C9orf47-202ENST00000375850 IGSF22Q8N9C0 903 aa25.48■■□□□ 1.67
C9orf47-202ENST00000375850 PJA1Q8NG27 643 aa25.48■■□□□ 1.67
C9orf47-202ENST00000375850 DRC1Q96MC2 740 aa25.48■■□□□ 1.67
C9orf47-202ENST00000375850 MRPL4Q9BYD3 311 aaKnown RBP25.48■■□□□ 1.67
C9orf47-202ENST00000375850 CXCL16Q9H2A7 254 aa25.48■■□□□ 1.67
C9orf47-202ENST00000375850 DDX19AQ9NUU7 478 aaKnown RBP25.48■■□□□ 1.67
C9orf47-202ENST00000375850 DLGAP2Q9P1A6 1054 aa25.48■■□□□ 1.67
C9orf47-202ENST00000375850 USP20Q9Y2K6 914 aa25.48■■□□□ 1.67
C9orf47-202ENST00000375850 SMIM28A0A1B0GU29 152 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 ADAM12O43184 909 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 ECM1Q16610 540 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 PABPC1LQ4VXU2 614 aaKnown RBP25.47■■□□□ 1.67
C9orf47-202ENST00000375850 GLRA4Q5JXX5 417 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 C1orf210Q8IVY1 113 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 SNX29Q8TEQ0 813 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 TIPINQ9BVW5 301 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 OSBPL6Q9BZF3 934 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 AVENQ9NQS1 362 aaPredicted RBP25.47■■□□□ 1.67
C9orf47-202ENST00000375850 CDY1Q9Y6F8 540 aa25.47■■□□□ 1.67
C9orf47-202ENST00000375850 MYO15AQ9UKN7 3530 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 CCDC169A6NNP5 214 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 U2AF2P26368 475 aaKnown RBP eCLIP25.46■■□□□ 1.67
C9orf47-202ENST00000375850 MAGEA9P43362 315 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 GPC5P78333 572 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 NTHL1P78549 312 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 ZNF568Q3ZCX4 644 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 KRT79Q5XKE5 535 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 ERMP1Q7Z2K6 904 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 KCTD17Q8N5Z5 321 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 ACO2Q99798 780 aaKnown RBP25.46■■□□□ 1.67
C9orf47-202ENST00000375850 PTPRHQ9HD43 1115 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 GDE1Q9NZC3 331 aa25.46■■□□□ 1.67
C9orf47-202ENST00000375850 SYN3O14994 580 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 DCNP07585 359 aaKnown RBP25.45■■□□□ 1.66
C9orf47-202ENST00000375850 MCF2P10911 925 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 PRPHP41219 470 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 NPTX2P47972 431 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 PEX3P56589 373 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 SPECC1Q5M775 1068 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 SLC8B1Q6J4K2 584 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 ALKAL1Q6UXT8 129 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 ZNF461Q8TAF7 563 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 KCNG4Q8TDN1 519 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 DDX23Q9BUQ8 820 aaKnown RBP25.45■■□□□ 1.66
C9orf47-202ENST00000375850 CDT1Q9H211 546 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 ARHGAP28Q9P2N2 729 aa25.45■■□□□ 1.66
C9orf47-202ENST00000375850 DNMT3BQ9UBC3 853 aaKnown RBP25.45■■□□□ 1.66
C9orf47-202ENST00000375850 MRPS23Q9Y3D9 190 aaKnown RBP25.45■■□□□ 1.66
C9orf47-202ENST00000375850 KANSL1LA0AUZ9 987 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 KCNE1P15382 129 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 TKTP29401 623 aaKnown RBP25.44■■□□□ 1.66
C9orf47-202ENST00000375850 ELF1P32519 619 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 RPL9P32969 192 aaKnown RBP25.44■■□□□ 1.66
C9orf47-202ENST00000375850 PTGDRQ13258 359 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 MLF2Q15773 248 aaPredicted RBP25.44■■□□□ 1.66
C9orf47-202ENST00000375850 CD300LGQ6UXG3 332 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 NPAS3Q8IXF0 933 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 ITFG1Q8TB96 612 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 ACAP3Q96P50 834 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 RPP25Q9BUL9 199 aaKnown RBP25.44■■□□□ 1.66
C9orf47-202ENST00000375850 BCO2Q9BYV7 579 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 KMT5AQ9NQR1 393 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 KIF3AQ9Y496 699 aa25.44■■□□□ 1.66
C9orf47-202ENST00000375850 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.44■■□□□ 1.66
C9orf47-202ENST00000375850 ARHGEF37A1IGU5 675 aa25.43■■□□□ 1.66
C9orf47-202ENST00000375850 H7C4K7 107 aa25.43■■□□□ 1.66
C9orf47-202ENST00000375850 ECI2O75521 394 aa25.43■■□□□ 1.66
C9orf47-202ENST00000375850 MAFFQ9ULX9 164 aa25.43■■□□□ 1.66
C9orf47-202ENST00000375850 PODXLO00592 558 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 HIP1RO75146 1068 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 LRG1P02750 347 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 SP9P0CG40 484 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 SLC44A4Q53GD3 710 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 C3orf58Q8NDZ4 430 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 NELL2Q99435 816 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 NTPCRQ9BSD7 190 aaKnown RBP25.42■■□□□ 1.66
C9orf47-202ENST00000375850 TCHPQ9BT92 498 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 GOLGA2P5Q9HBQ8 144 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 POLD4Q9HCU8 107 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 CNTN3Q9P232 1028 aa25.42■■□□□ 1.66
C9orf47-202ENST00000375850 MICAL2O94851 1124 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 ABLIM3O94929 683 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 RHOP08100 348 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 PTPN2P17706 415 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 PROZP22891 400 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 BRCC3P46736 316 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 ID4P47928 161 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 ROR1Q01973 937 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 SNW1Q13573 536 aaKnown RBP25.41■■□□□ 1.66
C9orf47-202ENST00000375850 ZNF528Q3MIS6 628 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 VARS2Q5ST30 1063 aaKnown RBP25.41■■□□□ 1.66
C9orf47-202ENST00000375850 TPGS2Q68CL5 300 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 MPZL3Q6UWV2 235 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 DTHD1Q6ZMT9 781 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 DAW1Q8N136 415 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 CEP120Q8N960 986 aa25.41■■□□□ 1.66
C9orf47-202ENST00000375850 TARS2Q9BW92 718 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms