RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 TNFSF9P41273 254 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 SOX4Q06945 474 aaPredicted RBP23.73■■□□□ 1.39
NINJ1-201ENST00000375446 KCNA1Q09470 495 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 ZBTB41Q5SVQ8 909 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 KIAA0319Q5VV43 1072 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 KIAA1841Q6NSI8 718 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 UHRF1Q96T88 793 aaPredicted RBP23.73■■□□□ 1.39
NINJ1-201ENST00000375446 GOLGA2P5Q9HBQ8 144 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 GDPD2Q9HCC8 539 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 CHST7Q9NS84 486 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 FAM50BQ9Y247 325 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 HPSEQ9Y251 543 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 HCFC2Q9Y5Z7 792 aa23.73■■□□□ 1.39
NINJ1-201ENST00000375446 TMEM189-UBE2V1I3L0A0 370 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 ACTN4O43707 911 aaKnown RBP23.72■■□□□ 1.39
NINJ1-201ENST00000375446 CNPP09543 421 aaKnown RBP23.72■■□□□ 1.39
NINJ1-201ENST00000375446 IL9P15248 144 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 AFMP43652 599 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 CLCNKBP51801 687 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 DSG1Q02413 1049 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 SMAD4Q13485 552 aaKnown RBP23.72■■□□□ 1.39
NINJ1-201ENST00000375446 USP41Q3LFD5 358 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 DCLRE1AQ6PJP8 1040 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 CASP10Q92851 521 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 HPS3Q969F9 1004 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 DDX27Q96GQ7 796 aaKnown RBP23.72■■□□□ 1.39
NINJ1-201ENST00000375446 B3GALT6Q96L58 329 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 NECAB3Q96P71 396 aaPredicted RBP23.72■■□□□ 1.39
NINJ1-201ENST00000375446 KLHL5Q96PQ7 755 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 BLZF1Q9H2G9 400 aa23.72■■□□□ 1.39
NINJ1-201ENST00000375446 RPF1Q9H9Y2 349 aaKnown RBP23.72■■□□□ 1.39
NINJ1-201ENST00000375446 CUL9Q8IWT3 2517 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.71■■□□□ 1.39
NINJ1-201ENST00000375446 FAM237AA0A1B0GTK4 181 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 TTC26A0AVF1 554 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 MBTPS2O43462 519 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 B3GAT3O94766 335 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 CASP1P29466 404 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 PPP2R3AQ06190 1150 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 ENOX2Q16206 610 aaKnown RBP23.71■■□□□ 1.39
NINJ1-201ENST00000375446 UPP1Q16831 310 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 ANKRD54Q6NXT1 300 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 PPFIBP1Q86W92 1011 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 GRAMD1CQ8IYS0 662 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 SYCP3Q8IZU3 236 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 SMRP1Q8NCR6 262 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 C18orf25Q96B23 403 aaPredicted RBP23.71■■□□□ 1.39
NINJ1-201ENST00000375446 USP25Q9UHP3 1055 aa23.71■■□□□ 1.39
NINJ1-201ENST00000375446 CPSF3Q9UKF6 684 aaKnown RBP23.71■■□□□ 1.39
NINJ1-201ENST00000375446 A0A1W2PQ27 194 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 A0A1W2PQ64 194 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 A0A1W2PQD8 194 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 PRPF6O94906 941 aaKnown RBP23.7■■□□□ 1.38
NINJ1-201ENST00000375446 IGFBP6P24592 240 aaPredicted RBP23.7■■□□□ 1.38
NINJ1-201ENST00000375446 KLRC2P26717 231 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 ADSSP30520 456 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 ELAVL2Q12926 359 aaKnown RBP23.7■■□□□ 1.38
NINJ1-201ENST00000375446 CUL4BQ13620 913 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 POSTNQ15063 836 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 TPRNQ4KMQ1 711 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 STXBP4Q6ZWJ1 553 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 UNC13DQ70J99 1090 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 GPR65Q8IYL9 337 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 SLC22A17Q8WUG5 538 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 RIN2Q8WYP3 895 aaPredicted RBP23.7■■□□□ 1.38
NINJ1-201ENST00000375446 POMGNT1Q8WZA1 660 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 RXFP1Q9HBX9 757 aa23.7■■□□□ 1.38
NINJ1-201ENST00000375446 AGO2Q9UKV8 859 aaKnown RBP23.7■■□□□ 1.38
NINJ1-201ENST00000375446 LACTBL1A8MY62 500 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 PODXLO00592 558 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 EPCAMP16422 314 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 RPL9P32969 192 aaKnown RBP23.69■■□□□ 1.38
NINJ1-201ENST00000375446 SYKP43405 635 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 ACOT2P49753 483 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 NDUFA8P51970 172 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 SPAG1Q07617 926 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 FAM26FQ5R3K3 315 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 FAM171A1Q5VUB5 890 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 CD300LGQ6UXG3 332 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 FSIP1Q8NA03 581 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 C3orf58Q8NDZ4 430 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 GLIS3Q8NEA6 775 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 KIF12Q96FN5 646 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 PAGE5Q96GU1 130 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 TMEM206Q9H813 350 aa23.69■■□□□ 1.38
NINJ1-201ENST00000375446 PVALEFA0A1B0GWK0 134 aa23.68■■□□□ 1.38
NINJ1-201ENST00000375446 TEX28O15482 410 aa23.68■■□□□ 1.38
NINJ1-201ENST00000375446 ADRB2P07550 413 aa23.68■■□□□ 1.38
NINJ1-201ENST00000375446 HOXB8P17481 243 aaPredicted RBP23.68■■□□□ 1.38
NINJ1-201ENST00000375446 SMAD2Q15796 467 aaKnown RBP23.68■■□□□ 1.38
NINJ1-201ENST00000375446 RTP2Q5QGT7 225 aa23.68■■□□□ 1.38
NINJ1-201ENST00000375446 SYCE2Q6PIF2 218 aa23.68■■□□□ 1.38
NINJ1-201ENST00000375446 FAM212AQ96EL1 285 aa23.68■■□□□ 1.38
NINJ1-201ENST00000375446 TTPALQ9BTX7 342 aa23.68■■□□□ 1.38
NINJ1-201ENST00000375446 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.68■■□□□ 1.38
NINJ1-201ENST00000375446 TUBGCP4Q9UGJ1 667 aa23.68■■□□□ 1.38
NINJ1-201ENST00000375446 ADH1AP07327 375 aa23.67■■□□□ 1.38
NINJ1-201ENST00000375446 CLCN4P51793 760 aa23.67■■□□□ 1.38
NINJ1-201ENST00000375446 EHHADHQ08426 723 aa23.67■■□□□ 1.38
NINJ1-201ENST00000375446 ZBTB6Q15916 424 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms