RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 ADRB2P07550 413 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 CNPP09543 421 aaKnown RBP23.19■■□□□ 1.3
TMEM54-202ENST00000373463 ABCD1P33897 745 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 HOXD13P35453 343 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 MATR3P43243 847 aaKnown RBP eCLIP23.19■■□□□ 1.3
TMEM54-202ENST00000373463 AFMP43652 599 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 CLCNKBP51801 687 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 ASIC1P78348 528 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 NUCB2P80303 420 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 CUL4BQ13620 913 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 PTCRAQ6ISU1 281 aaPredicted RBP23.19■■□□□ 1.3
TMEM54-202ENST00000373463 LLGL2Q6P1M3 1020 aa23.19■■□□□ 1.3
TMEM54-202ENST00000373463 CPSF3Q9UKF6 684 aaKnown RBP23.19■■□□□ 1.3
TMEM54-202ENST00000373463 DLL1O00548 723 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 PRPF6O94906 941 aaKnown RBP23.18■■□□□ 1.3
TMEM54-202ENST00000373463 SLFN14P0C7P3 912 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 CA8P35219 290 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 NDUFA8P51970 172 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 AMPD3Q01432 767 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 DSG1Q02413 1049 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 SPAG1Q07617 926 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 UPP1Q16831 310 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 ZSWIM2Q8NEG5 633 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 SLC22A17Q8WUG5 538 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 KLHL5Q96PQ7 755 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 MSTO1Q9BUK6 570 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 LRRC27Q9C0I9 530 aa23.18■■□□□ 1.3
TMEM54-202ENST00000373463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.17■■□□□ 1.3
TMEM54-202ENST00000373463 TMEM189-UBE2V1I3L0A0 370 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 C2CD2LO14523 706 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 MBTPS2O43462 519 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 TADA2AO75478 443 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 GLUD2P49448 558 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 ZBTB6Q15916 424 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 RTP2Q5QGT7 225 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 SYCE2Q6PIF2 218 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 CRELD2Q6UXH1 353 aaPredicted RBP23.17■■□□□ 1.3
TMEM54-202ENST00000373463 EPM2AIP1Q7L775 607 aaPredicted RBP23.17■■□□□ 1.3
TMEM54-202ENST00000373463 SMRP1Q8NCR6 262 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 FEZF2Q8TBJ5 459 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 ACCSQ96QU6 501 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 STK39Q9UEW8 545 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 TUBGCP4Q9UGJ1 667 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 CD207Q9UJ71 328 aa23.17■■□□□ 1.3
TMEM54-202ENST00000373463 A0A1W2PQ27 194 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 A0A1W2PQ64 194 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 A0A1W2PQD8 194 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 LACTBL1A8MY62 500 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 KLRC4O43908 158 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 URODP06132 367 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 EPCAMP16422 314 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 ACOT2P49753 483 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 UNC13DQ70J99 1090 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 PAGE5Q96GU1 130 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 PLEKHA5Q9HAU0 1116 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 RXFP1Q9HBX9 757 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 MRPL17Q9NRX2 175 aaKnown RBP23.16■■□□□ 1.3
TMEM54-202ENST00000373463 PCDHB13Q9Y5F0 798 aa23.16■■□□□ 1.3
TMEM54-202ENST00000373463 SF3B1O75533 1304 aaKnown RBP eCLIP23.15■■□□□ 1.3
TMEM54-202ENST00000373463 CUL9Q8IWT3 2517 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 TEX28O15482 410 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 B3GAT3O94766 335 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 ALCAMQ13740 583 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 USP41Q3LFD5 358 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 TPRNQ4KMQ1 711 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 FAM26FQ5R3K3 315 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 ANKRD54Q6NXT1 300 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 DCLRE1AQ6PJP8 1040 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 FSIP1Q8NA03 581 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 UROC1Q96N76 676 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 UHRF1Q96T88 793 aaPredicted RBP23.15■■□□□ 1.3
TMEM54-202ENST00000373463 PYM1Q9BRP8 204 aaKnown RBP23.15■■□□□ 1.3
TMEM54-202ENST00000373463 S1PR5Q9H228 398 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 SLC38A7Q9NVC3 462 aa23.15■■□□□ 1.3
TMEM54-202ENST00000373463 AGO2Q9UKV8 859 aaKnown RBP23.15■■□□□ 1.3
TMEM54-202ENST00000373463 FSD2A1L4K1 749 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 I3L4J1 428 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 BRCC3P46736 316 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 CLCN4P51793 760 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 WNT7BP56706 349 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 SMAD4Q13485 552 aaKnown RBP23.14■■□□□ 1.29
TMEM54-202ENST00000373463 BMS1Q14692 1282 aaKnown RBP23.14■■□□□ 1.29
TMEM54-202ENST00000373463 KYAT1Q16773 422 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 FAM171A1Q5VUB5 890 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 SLFN12LQ6IEE8 588 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 PRSS55Q6UWB4 352 aaPredicted RBP23.14■■□□□ 1.29
TMEM54-202ENST00000373463 CEP57L1Q8IYX8 460 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 CD320Q9NPF0 282 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 CDH22Q9UJ99 828 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 C5orf42Q9H799 3197 aa23.14■■□□□ 1.29
TMEM54-202ENST00000373463 PODXLO00592 558 aa23.13■■□□□ 1.29
TMEM54-202ENST00000373463 SYKP43405 635 aa23.13■■□□□ 1.29
TMEM54-202ENST00000373463 GUCY2FP51841 1108 aa23.13■■□□□ 1.29
TMEM54-202ENST00000373463 PPP2R3AQ06190 1150 aa23.13■■□□□ 1.29
TMEM54-202ENST00000373463 SMAD2Q15796 467 aaKnown RBP23.13■■□□□ 1.29
TMEM54-202ENST00000373463 PUS10Q3MIT2 529 aaKnown RBP23.13■■□□□ 1.29
TMEM54-202ENST00000373463 KANK3Q6NY19 840 aa23.13■■□□□ 1.29
TMEM54-202ENST00000373463 GPR65Q8IYL9 337 aa23.13■■□□□ 1.29
TMEM54-202ENST00000373463 RIN2Q8WYP3 895 aaPredicted RBP23.13■■□□□ 1.29
TMEM54-202ENST00000373463 POMGNT1Q8WZA1 660 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms