RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CHRNA3P32297 505 aa25.5■■□□□ 1.67
CDK9-201ENST00000373264 IFFO1Q0D2I5 559 aa25.5■■□□□ 1.67
CDK9-201ENST00000373264 TREML2Q5T2D2 321 aa25.5■■□□□ 1.67
CDK9-201ENST00000373264 C1orf131Q8NDD1 294 aaKnown RBP25.5■■□□□ 1.67
CDK9-201ENST00000373264 MDM1Q8TC05 714 aa25.5■■□□□ 1.67
CDK9-201ENST00000373264 FAM118BQ9BPY3 351 aa25.5■■□□□ 1.67
CDK9-201ENST00000373264 SSC5DA1L4H1 1573 aa25.5■■□□□ 1.67
CDK9-201ENST00000373264 BRCA1P38398 1863 aaKnown RBP25.5■■□□□ 1.67
CDK9-201ENST00000373264 EXTL3O43909 919 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 COILP38432 576 aaPredicted RBP25.49■■□□□ 1.67
CDK9-201ENST00000373264 PMS2P54278 862 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 XKR3Q5GH77 459 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 MIS18BP1Q6P0N0 1132 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 EEPD1Q7L9B9 569 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 C12orf42Q96LP6 360 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 PCYOX1Q9UHG3 505 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 AGO2Q9UKV8 859 aaKnown RBP25.49■■□□□ 1.67
CDK9-201ENST00000373264 E7EVH7 732 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 SCP2P22307 547 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 HIRAP54198 1017 aaPredicted RBP25.49■■□□□ 1.67
CDK9-201ENST00000373264 ZNF302Q9NR11 478 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 FBXO40Q9UH90 709 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 NFASCO94856 1347 aa25.49■■□□□ 1.67
CDK9-201ENST00000373264 C4BPAP04003 597 aaKnown RBP25.48■■□□□ 1.67
CDK9-201ENST00000373264 MAPK4P31152 587 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 GTF2H1P32780 548 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 PIK3CAP42336 1068 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 OAZ1P54368 228 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 GCNT1Q02742 428 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 SLC29A2Q14542 456 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 MCOLN2Q8IZK6 566 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 OR5B17Q8NGF7 314 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 FNBP1Q96RU3 617 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 TLDC2A0PJX2 215 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 RWDD2BP57060 319 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 ZACNQ401N2 412 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 MYCBPAPQ8TBZ2 947 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 ZNF473Q8WTR7 871 aaKnown RBP25.48■■□□□ 1.67
CDK9-201ENST00000373264 CCT8L2Q96SF2 557 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 CHST7Q9NS84 486 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 UVRAGQ9P2Y5 699 aa25.48■■□□□ 1.67
CDK9-201ENST00000373264 POLR2AP24928 1970 aaKnown RBP25.48■■□□□ 1.67
CDK9-201ENST00000373264 NF2P35240 595 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 NLRP14Q86W24 1093 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 PNMA2Q9UL42 364 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 AFG3L2Q9Y4W6 797 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 OATP04181 439 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 TRIP13Q15645 432 aaPredicted RBP25.47■■□□□ 1.67
CDK9-201ENST00000373264 GNPTABQ3T906 1256 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 RUFY4Q6ZNE9 571 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 ANKRD35Q8N283 1001 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 PCYT2Q99447 389 aa25.47■■□□□ 1.67
CDK9-201ENST00000373264 RTP1P59025 263 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 PSMD6Q15008 389 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 C11orf70Q9BRQ4 267 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 RBAKQ9NYW8 714 aaPredicted RBP25.46■■□□□ 1.67
CDK9-201ENST00000373264 RASAL2Q9UJF2 1139 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 MAFBQ9Y5Q3 323 aaPredicted RBP25.46■■□□□ 1.67
CDK9-201ENST00000373264 ACO1P21399 889 aaKnown RBP25.46■■□□□ 1.67
CDK9-201ENST00000373264 SLCO1A2P46721 670 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 LIG3P49916 1009 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 STRN3Q13033 797 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 PPP2R5EQ16537 467 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 TMEM270Q6UE05 265 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 CCDC25Q86WR0 208 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 HEMGNQ9BXL5 484 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 PORCNQ9H237 461 aa25.46■■□□□ 1.67
CDK9-201ENST00000373264 PABPC3Q9H361 631 aaKnown RBP25.46■■□□□ 1.67
CDK9-201ENST00000373264 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.46■■□□□ 1.67
CDK9-201ENST00000373264 C19orf81C9J6K1 198 aa25.45■■□□□ 1.67
CDK9-201ENST00000373264 K7ERI5 159 aa25.45■■□□□ 1.67
CDK9-201ENST00000373264 TP73O15350 636 aa25.45■■□□□ 1.67
CDK9-201ENST00000373264 PPP2R2AP63151 447 aa25.45■■□□□ 1.67
CDK9-201ENST00000373264 ZNF668Q96K58 619 aaPredicted RBP25.45■■□□□ 1.67
CDK9-201ENST00000373264 CEP89Q96ST8 783 aa25.45■■□□□ 1.67
CDK9-201ENST00000373264 BTBD7Q9P203 1132 aa25.45■■□□□ 1.67
CDK9-201ENST00000373264 R3HDM2Q9Y2K5 976 aaKnown RBP25.45■■□□□ 1.67
CDK9-201ENST00000373264 TNFSF9P41273 254 aa25.45■■□□□ 1.66
CDK9-201ENST00000373264 STXBP2Q15833 593 aa25.45■■□□□ 1.66
CDK9-201ENST00000373264 CYP1B1Q16678 543 aa25.45■■□□□ 1.66
CDK9-201ENST00000373264 QPCTQ16769 361 aa25.45■■□□□ 1.66
CDK9-201ENST00000373264 USP37Q86T82 979 aa25.45■■□□□ 1.66
CDK9-201ENST00000373264 DEPTORQ8TB45 409 aa25.45■■□□□ 1.66
CDK9-201ENST00000373264 MSTO1Q9BUK6 570 aa25.45■■□□□ 1.66
CDK9-201ENST00000373264 DHX33Q9H6R0 707 aaKnown RBP25.45■■□□□ 1.66
CDK9-201ENST00000373264 DNAJC17Q9NVM6 304 aaKnown RBP25.45■■□□□ 1.66
CDK9-201ENST00000373264 NUB1Q9Y5A7 615 aa25.45■■□□□ 1.66
CDK9-201ENST00000373264 ATP2A1O14983 1001 aa25.44■■□□□ 1.66
CDK9-201ENST00000373264 UBA1P22314 1058 aaKnown RBP25.44■■□□□ 1.66
CDK9-201ENST00000373264 CLDN10P78369 228 aa25.44■■□□□ 1.66
CDK9-201ENST00000373264 IFI35P80217 286 aaPredicted RBP25.44■■□□□ 1.66
CDK9-201ENST00000373264 WDR44Q5JSH3 913 aa25.44■■□□□ 1.66
CDK9-201ENST00000373264 ANKS1BQ7Z6G8 1248 aa25.44■■□□□ 1.66
CDK9-201ENST00000373264 CDHR1Q96JP9 859 aa25.44■■□□□ 1.66
CDK9-201ENST00000373264 DKC1O60832 514 aaKnown RBP eCLIP25.44■■□□□ 1.66
CDK9-201ENST00000373264 GJC1P36383 396 aa25.44■■□□□ 1.66
CDK9-201ENST00000373264 DRG2P55039 364 aaKnown RBP25.44■■□□□ 1.66
CDK9-201ENST00000373264 AGBL2Q5U5Z8 902 aa25.44■■□□□ 1.66
CDK9-201ENST00000373264 EPS8L3Q8TE67 593 aaKnown RBP25.44■■□□□ 1.66
CDK9-201ENST00000373264 PCDHB4Q9Y5E5 795 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms