RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 ARAP2Q8WZ64 1704 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 PJA2O43164 708 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 RGS7P49802 495 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 MYL6P60660 151 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 ALCAMQ13740 583 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 DNAJC24Q6P3W2 148 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 CATSPERGQ6ZRH7 1159 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 GPRASP2Q96D09 838 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 VPS37BQ9H9H4 285 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 RNF14Q9UBS8 474 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 UMODL1Q5DID0 1318 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 B4GALT5O43286 388 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 KRT1P04264 644 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 IVLP07476 585 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 IFT88Q13099 833 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 COBLL1Q53SF7 1204 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 OTUD6BQ8N6M0 293 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 C1orf131Q8NDD1 294 aaKnown RBP14.09□□□□□ -0.15
NCDN-203ENST00000373253 HSPH1Q92598 858 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 C9orf72Q96LT7 481 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 DBR1Q9UK59 544 aaKnown RBP14.09□□□□□ -0.15
NCDN-203ENST00000373253 PCDHGC5Q9Y5F6 944 aa14.09□□□□□ -0.15
NCDN-203ENST00000373253 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 MYO1CO00159 1063 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 SYF2O95926 243 aaKnown RBP14.08□□□□□ -0.16
NCDN-203ENST00000373253 MMP14P50281 582 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
NCDN-203ENST00000373253 COL5A3P25940 1745 aaPredicted RBP14.08□□□□□ -0.16
NCDN-203ENST00000373253 SGK1O00141 431 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 ECEL1O95672 775 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 ATP11AP98196 1134 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 NEDD9Q14511 834 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 EMC1Q8N766 993 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 GDAP1Q8TB36 358 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.08□□□□□ -0.16
NCDN-203ENST00000373253 LRRN4Q8WUT4 740 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 OPTNQ96CV9 577 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 INPP4AQ96PE3 977 aaPredicted RBP14.08□□□□□ -0.16
NCDN-203ENST00000373253 MCEEQ96PE7 176 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 XPNPEP1Q9NQW7 623 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 LCMT1Q9UIC8 334 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 MRPL42Q9Y6G3 142 aaKnown RBP14.08□□□□□ -0.16
NCDN-203ENST00000373253 CEP350Q5VT06 3117 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 GLRA2P23416 452 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 HSD17B3P37058 310 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 NFX1Q12986 1120 aaKnown RBP14.08□□□□□ -0.16
NCDN-203ENST00000373253 UBA3Q8TBC4 463 aa14.08□□□□□ -0.16
NCDN-203ENST00000373253 TTLL13PA6NNM8 815 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 GOLGA8KD6RF30 607 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 GAS8O95995 478 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 CFHP08603 1231 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 NUMBP49757 651 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 ALDH5A1P51649 535 aaPredicted RBP14.07□□□□□ -0.16
NCDN-203ENST00000373253 ERICH1Q86X53 443 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 JAMLQ86YT9 394 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 FMNL3Q8IVF7 1028 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.07□□□□□ -0.16
NCDN-203ENST00000373253 RPF1Q9H9Y2 349 aaKnown RBP14.07□□□□□ -0.16
NCDN-203ENST00000373253 SPON1Q9HCB6 807 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 RRP15Q9Y3B9 282 aaKnown RBP14.07□□□□□ -0.16
NCDN-203ENST00000373253 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.07□□□□□ -0.16
NCDN-203ENST00000373253 KIAA1551Q9HCM1 1747 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 FOXO6A8MYZ6 492 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 HOOK3Q86VS8 718 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 MIS12Q9H081 205 aa14.07□□□□□ -0.16
NCDN-203ENST00000373253 NGRNQ9NPE2 291 aaKnown RBP14.07□□□□□ -0.16
NCDN-203ENST00000373253 SAE1Q9UBE0 346 aaPredicted RBP14.07□□□□□ -0.16
NCDN-203ENST00000373253 CXCL8P10145 99 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 NEUROG2Q9H2A3 272 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 FAM49BQ9NUQ9 324 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 PARP2Q9UGN5 583 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 RALAP11233 206 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 ATF2P15336 505 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 KCNA2P16389 499 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 GTF2BQ00403 316 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 PPP2R5DQ14738 602 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 BMT2Q1RMZ1 405 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 KIZQ2M2Z5 673 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 PRAMEF19Q5SWL8 479 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 OR6B2Q6IFH4 312 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 RUFY4Q6ZNE9 571 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 FIZ1Q96SL8 496 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 PNMA2Q9UL42 364 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 CCDC188H7C350 402 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 DYNC1LI2O43237 492 aaPredicted RBP14.06□□□□□ -0.16
NCDN-203ENST00000373253 USP2O75604 605 aaPredicted RBP14.06□□□□□ -0.16
NCDN-203ENST00000373253 MARSP56192 900 aaKnown RBP14.06□□□□□ -0.16
NCDN-203ENST00000373253 LONRF1Q17RB8 773 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 PPP6R3Q5H9R7 873 aaPredicted RBP14.06□□□□□ -0.16
NCDN-203ENST00000373253 WHAMMQ8TF30 809 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 ATP8B4Q8TF62 1192 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 ANKRD36BP1Q96IX9 119 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 KLK14Q9P0G3 267 aa14.06□□□□□ -0.16
NCDN-203ENST00000373253 PRRC2BQ5JSZ5 2229 aaKnown RBP14.06□□□□□ -0.16
NCDN-203ENST00000373253 PASKQ96RG2 1323 aa14.05□□□□□ -0.16
NCDN-203ENST00000373253 STAM2O75886 525 aa14.05□□□□□ -0.16
NCDN-203ENST00000373253 RGS20O76081 388 aa14.05□□□□□ -0.16
NCDN-203ENST00000373253 KRT15P19012 456 aa14.05□□□□□ -0.16
NCDN-203ENST00000373253 OSBPP22059 807 aa14.05□□□□□ -0.16
NCDN-203ENST00000373253 KRT17Q04695 432 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms