RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 NAT14Q8WUY8 206 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 COA7Q96BR5 231 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 SENP7Q9BQF6 1050 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 CCDC90BQ9GZT6 254 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 SEMA6BQ9H3T3 888 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 NIP7Q9Y221 180 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTPN1-201ENST00000371621 TBX10O75333 385 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 SRGAP2CP0DJJ0 459 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 SRGAP2BP0DMP2 458 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 MAGEA4P43358 317 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 RASGRF1Q13972 1273 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 PIGWQ7Z7B1 504 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 RSPH3Q86UC2 560 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 CLVS1Q8IUQ0 354 aaPredicted RBP12.44□□□□□ -0.42
PTPN1-201ENST00000371621 CYP4X1Q8N118 509 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 COQ7Q99807 217 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 UTYO14607 1347 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 ZC3H4Q9UPT8 1303 aaKnown RBP12.44□□□□□ -0.42
PTPN1-201ENST00000371621 PI4K2BG5E9Z4 385 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 DDX3XO00571 662 aaKnown RBP eCLIP12.44□□□□□ -0.426e-28■■□□□ 12.5
PTPN1-201ENST00000371621 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 CLCN2P51788 898 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 ADCY7P51828 1080 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 TMEM62Q0P6H9 643 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 ITGADQ13349 1161 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 CARTPTQ16568 116 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 PDXDC2PQ6P474 469 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 APTXQ7Z2E3 356 aaKnown RBP12.44□□□□□ -0.42
PTPN1-201ENST00000371621 SH3TC2Q8TF17 1288 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 THAP2Q9H0W7 228 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 TRNAU1APQ9NX07 287 aaKnown RBP12.44□□□□□ -0.42
PTPN1-201ENST00000371621 CPDO75976 1380 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 COL15A1P39059 1388 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 DDX39AO00148 427 aaKnown RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 ABLIM1O14639 778 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 OR6B1O95007 311 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 GYG1P46976 350 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 COASYQ13057 564 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 MAPK11Q15759 364 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 LIN9Q5TKA1 542 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 SH3RF1Q7Z6J0 888 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 SRBD1Q8N5C6 995 aaKnown RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 RBM17Q96I25 401 aaKnown RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 NUP85Q9BW27 656 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 TMEM120AQ9BXJ8 343 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 MAGEF1Q9HAY2 307 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 ZNF212Q9UDV6 495 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 C2orf71A6NGG8 1288 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 ENO3P13929 434 aaPredicted RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 GFAPP14136 432 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 SSTR3P32745 418 aaPredicted RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 TRPC1P48995 793 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 GPC5P78333 572 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 MYL7Q01449 175 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 IL1RL1Q01638 556 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 NR1H3Q13133 447 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 PDK3Q15120 406 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 ATG16L1Q676U5 607 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 RINT1Q6NUQ1 792 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 PDIK1LQ8N165 341 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 SLC30A5Q8TAD4 765 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 ZFAND2BQ8WV99 257 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 CAPSLQ8WWF8 208 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 ECSITQ9BQ95 431 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 NACA2Q9H009 215 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 FLT1P17948 1338 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 C5orf60A6NFR6 353 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 AKR1B1P15121 316 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 COILP38432 576 aaPredicted RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 VCPP55072 806 aaKnown RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 DNAL1Q4LDG9 190 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 C4orf50Q6ZRC1 276 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 ZNF564Q8TBZ8 553 aaPredicted RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 DGCR14Q96DF8 476 aaKnown RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 PHF20Q9BVI0 1012 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 MAF1Q9H063 256 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 WWP1Q9H0M0 922 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 HERC5Q9UII4 1024 aaKnown RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 SMG5Q9UPR3 1016 aaKnown RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 NR2E1Q9Y466 385 aa12.43□□□□□ -0.42
PTPN1-201ENST00000371621 CLTCQ00610 1675 aaKnown RBP12.43□□□□□ -0.42
PTPN1-201ENST00000371621 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 FCHO1O14526 889 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 MAP3K13O43283 966 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 PDE8BO95263 885 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 PLA2G4BP0C869 781 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 INAQ16352 499 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 USP17L2Q6R6M4 530 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 BTNL9Q6UXG8 535 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 RNF19BQ6ZMZ0 732 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 FAM178BQ8IXR5 827 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 ZNF786Q8N393 782 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 INPP5DQ92835 1189 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 DDX25Q9UHL0 483 aaKnown RBP12.42□□□□□ -0.42
PTPN1-201ENST00000371621 NEU2Q9Y3R4 380 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
PTPN1-201ENST00000371621 A6NHS1 94 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms