RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 MTMR4Q9NYA4 1195 aa18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 NQO1P15559 274 aaKnown RBP18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 MAPK7Q13164 816 aa18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 DAB2IPQ5VWQ8 1189 aa18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 SWSAP1Q6NVH7 229 aa18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 LVRNQ6Q4G3 990 aa18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 FSD1LQ9BXM9 530 aa18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 FAM129AQ9BZQ8 928 aa18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 CCDC90BQ9GZT6 254 aa18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 DHX35Q9H5Z1 703 aaKnown RBP18.08■□□□□ 0.48
PTP4A1-201ENST00000370651 TBX3O15119 743 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 ZBTB41Q5SVQ8 909 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 LMBRD2Q68DH5 695 aaPredicted RBP18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 KCNK16Q96T55 309 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 SENP7Q9BQF6 1050 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 SPDYE2BA6NHP3 402 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 H3BRJ5 948 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 PPP1R12AO14974 1030 aaPredicted RBP18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 SPDYE6P0CI01 402 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 NPR1P16066 1061 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 FXR2P51116 673 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 TNFAIP2Q03169 654 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 DNAJC3Q13217 504 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 TRIP10Q15642 601 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 DPP9Q86TI2 863 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 STX18Q9P2W9 335 aaKnown RBP18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 VHLP40337 213 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 PCYT1AP49585 367 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 ACTR2P61160 394 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 CCNA1P78396 465 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 ZNF200P98182 395 aaPredicted RBP18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 SPOUT1Q5T280 376 aaKnown RBP18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 PSPC1Q8WXF1 523 aaKnown RBP18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 MKNK1Q9BUB5 465 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 SPATA31A3Q5VYP0 1347 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 LRRC8EQ6NSJ5 796 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 TDRD3Q9H7E2 651 aaKnown RBP18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 PLEKHG2Q9H7P9 1386 aa18.07■□□□□ 0.48
PTP4A1-201ENST00000370651 UBE2Q2LH0YL09 131 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 SASH3O75995 380 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 ZFXP17010 805 aaPredicted RBP18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 TOB1P50616 345 aaPredicted RBP18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 RC3H1Q5TC82 1133 aaKnown RBP18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 ZC3H7BQ9UGR2 993 aaKnown RBP18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 AP3M2P53677 418 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 TTI2Q6NXR4 508 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 NSUN6Q8TEA1 469 aaKnown RBP18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 CAVIN3Q969G5 261 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 NSL1Q96IY1 281 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 ATP8B3O60423 1300 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 AARSP49588 968 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 STXBP2Q15833 593 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 DUOXA2Q1HG44 320 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 CDC26Q8NHZ8 85 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 KLF6Q99612 283 aaPredicted RBP18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 STAP1Q9ULZ2 295 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 ZBTB12Q9Y330 459 aaPredicted RBP18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 APOL1O14791 398 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 FNTAP49354 379 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 PTK7Q13308 1070 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 THAP11Q96EK4 314 aa18.06■□□□□ 0.48
PTP4A1-201ENST00000370651 MYO3AQ8NEV4 1616 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 ANP32DO95626 131 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 HDAC4P56524 1084 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 TROAPQ12815 778 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 FASTKD1Q53R41 847 aaKnown RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 SLC13A5Q86YT5 568 aaPredicted RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 GEMIN8Q9NWZ8 242 aaKnown RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 TYW5A2RUC4 315 aaKnown RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 KCNN4O15554 427 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 ATMINO43313 823 aaPredicted RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 MAN1A2O60476 641 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 APRTP07741 180 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 IL10P22301 178 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 FAM118BQ9BPY3 351 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 MOV10L1Q9BXT6 1211 aaKnown RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 RAB6BQ9NRW1 208 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 SCHIP1Q9P0W5 487 aaPredicted RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 XPO7Q9UIA9 1087 aaKnown RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 UBTFL6P0CB48 400 aaPredicted RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 CENPCQ03188 943 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 C3orf62Q6ZUJ4 267 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 CATSPER4Q7RTX7 472 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 MRPL4Q9BYD3 311 aaKnown RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 KLHL2O95198 593 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 TARSP26639 723 aaKnown RBP18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 Q3C1V9 767 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 ITPRIPL1Q6GPH6 555 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 ZNF302Q9NR11 478 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 CHMP2BQ9UQN3 213 aa18.05■□□□□ 0.48
PTP4A1-201ENST00000370651 ACADSP16219 412 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 SESN2P58004 480 aaPredicted RBP18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 ZC2HC1CQ53FD0 456 aaPredicted RBP18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 TTC39CQ8N584 583 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 EPS8L3Q8TE67 593 aaKnown RBP18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 C18orf8Q96DM3 657 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 ATXN7L3BQ96GX2 97 aa18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 YWHABP31946 246 aaKnown RBP18.04■□□□□ 0.48
PTP4A1-201ENST00000370651 SYCP2LQ5T4T6 812 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms