RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 B3GNT4Q9C0J1 378 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ELP3Q9H9T3 547 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CD209Q9NNX6 404 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 C11orf16Q9NQ32 467 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 DBF4Q9UBU7 674 aaPredicted RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 GGT7Q9UJ14 662 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ASB3Q9Y575 518 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 PCDHB3Q9Y5E6 796 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 V9GY48 417 aaPredicted RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 M0R2C6 588 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 WNT7AO00755 349 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 NDUFB5O43674 189 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CYTH3O43739 400 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CSF1RP07333 972 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 PHKA1P46020 1223 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 SULT2A1Q06520 285 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 TMEM62Q0P6H9 643 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 PTGDRQ13258 359 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CUL4AQ13619 759 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 PPP2R5DQ14738 602 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 SAFBQ15424 915 aaKnown RBP eCLIP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 MOB2Q70IA6 237 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 INTS8Q75QN2 995 aaKnown RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 SLC9B2Q86UD5 537 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 HEATR4Q86WZ0 1026 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 LURAP1LQ8IV03 231 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CTNNBL1Q8WYA6 563 aaPredicted RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CCT6BQ92526 530 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 GJA10Q969M2 543 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ZNF845Q96IR2 970 aaPredicted RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 SPATA17Q96L03 361 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 TTC25Q96NG3 672 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 PURBQ96QR8 312 aaKnown RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 ADAM33Q9BZ11 813 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 GOLPH3LQ9H4A5 285 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 LIN28AQ9H9Z2 209 aaKnown RBP5.44□□□□□ -1.54
UBE3D-202ENST00000369746 CRLF2Q9HC73 371 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 PDLIM7Q9NR12 457 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 SIRPGQ9P1W8 387 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 FAM184BQ9ULE4 1060 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 DAGLAQ9Y4D2 1042 aa5.44□□□□□ -1.54
UBE3D-202ENST00000369746 A0A087X0B3 334 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 PLOD2O00469 737 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 STRNO43815 780 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 EFCAB14O75071 495 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 TOP1P11387 765 aaKnown RBP5.43□□□□□ -1.54
UBE3D-202ENST00000369746 DGKGP49619 791 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 CCNA1P78396 465 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 NFIAQ12857 509 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 PPFIA1Q13136 1202 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 SEPT6Q14141 434 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 SSPNQ14714 243 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 SLC14A2Q15849 920 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 BOLA3Q53S33 107 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 BEND6Q5SZJ8 279 aaPredicted RBP5.43□□□□□ -1.54
UBE3D-202ENST00000369746 NUP54Q7Z3B4 507 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 SLC51AQ86UW1 340 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 BPHLQ86WA6 291 aaPredicted RBP5.43□□□□□ -1.54
UBE3D-202ENST00000369746 EPHX4Q8IUS5 362 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 SLC41A1Q8IVJ1 513 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 ZNF619Q8N2I2 560 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
UBE3D-202ENST00000369746 BBOF1Q8ND07 529 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 OR6C4Q8NGE1 309 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 NPLOC4Q8TAT6 608 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 CHAC2Q8WUX2 184 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 FSD1Q9BTV5 496 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 CCDC28BQ9BUN5 200 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 IDI2Q9BXS1 227 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 LMAN2LQ9H0V9 348 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 VPS37BQ9H9H4 285 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 ANLNQ9NQW6 1124 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 ABCF3Q9NUQ8 709 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 L1RE1Q9UN81 338 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 MINPP1Q9UNW1 487 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 FAM196BA6NMK8 535 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 ALG1L2C9J202 215 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 AP3B1O00203 1094 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 CABYRO75952 493 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 ALAS2P22557 587 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 ATP5DP30049 168 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 ALDH3A1P30838 453 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 GNAQP50148 359 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 ARFIP1P53367 373 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 EVCP57679 992 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 TUBA4AP68366 448 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 MRPS25P82663 173 aaKnown RBP5.43□□□□□ -1.54
UBE3D-202ENST00000369746 BEX3Q00994 111 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 DPYDQ12882 1025 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 MTX1Q13505 466 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 MAP7Q14244 749 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 CRY1Q16526 586 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 OCLNQ16625 522 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 TRIM71Q2Q1W2 868 aaKnown RBP5.43□□□□□ -1.54
UBE3D-202ENST00000369746 PLA2G4EQ3MJ16 856 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 NBPF12Q5TAG4 269 aaPredicted RBP5.43□□□□□ -1.54
UBE3D-202ENST00000369746 THEMIS2Q5TEJ8 643 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 NXNQ6DKJ4 435 aa5.43□□□□□ -1.54
UBE3D-202ENST00000369746 THOC7Q6I9Y2 204 aaKnown RBP5.43□□□□□ -1.54
UBE3D-202ENST00000369746 NAA16Q6N069 864 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms