RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 TFRCP02786 760 aaKnown RBP15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 PIK3CAP42336 1068 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 CETN1Q12798 172 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 CCDC122Q5T0U0 273 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 SHC3Q92529 594 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 PRIMPOLQ96LW4 560 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 NUB1Q9Y5A7 615 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 LACTBL1A8MY62 500 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 SGPL1O95470 568 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 MCF2P10911 925 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 FERP16591 822 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 KRT83P78385 493 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 SNX17Q15036 470 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 SLC10A6Q3KNW5 377 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 ZNF569Q5MCW4 686 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 SLC30A5Q8TAD4 765 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 NT5C1BQ96P26 610 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 RNF19AQ9NV58 838 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 TAS2R14Q9NYV8 317 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 HES2Q9Y543 173 aa15.21■□□□□ 0.03
HMGCS2-201ENST00000369406 CYP26A1O43174 497 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 INHAP05111 366 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 MAGEA1P43355 309 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 GUCY2FP51841 1108 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 WDR49Q8IV35 697 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 GLYCTKQ8IVS8 523 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 FAM71AQ8IYT1 594 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 RAET1EQ8TD07 263 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 TSC1Q92574 1164 aa15.21■□□□□ 0.02
HMGCS2-201ENST00000369406 MACROD2A1Z1Q3 448 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 ERLIN2O94905 339 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 NPTXRO95502 500 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 CHRNB2P17787 502 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 SPA17Q15506 151 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 TRAPPC11Q7Z392 1133 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 USP37Q86T82 979 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 NOP9Q86U38 636 aaKnown RBP15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 SLC47A2Q86VL8 602 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 CXorf38Q8TB03 319 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 GCOM2Q9BZD3 368 aaPredicted RBP15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 DDX20Q9UHI6 824 aaKnown RBP15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 SIX4Q9UIU6 781 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 NAGPAQ9UK23 515 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 NOCTQ9UK39 431 aaKnown RBP15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 CAPN6Q9Y6Q1 641 aa15.2■□□□□ 0.02
HMGCS2-201ENST00000369406 RFX1P22670 979 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 EIF4BP23588 611 aaKnown RBP15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 USP8P40818 1118 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 MYL6P60660 151 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 TFAMQ00059 246 aaKnown RBP15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 NCOA4Q13772 614 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 JADE1Q6IE81 842 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 ZNF662Q6ZS27 426 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 CATSPER4Q7RTX7 472 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 KIF18AQ8NI77 898 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 PTCH2Q9Y6C5 1203 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 RRP9O43818 475 aaKnown RBP15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 B4GALT4O60513 344 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 FKTNO75072 461 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 ACO1P21399 889 aaKnown RBP15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 FAM47CQ5HY64 1035 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 LHX8Q68G74 356 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 PCDHB18PQ96TA0 734 aa15.19■□□□□ 0.02
HMGCS2-201ENST00000369406 KIF2AO00139 706 aaPredicted RBP15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 PJA2O43164 708 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 MOCS3O95396 460 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 CTSHP09668 335 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 CST5P28325 142 aaPredicted RBP15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 UBXN11Q5T124 520 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 EPS8L1Q8TE68 723 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 NXF3Q9H4D5 531 aaKnown RBP15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 RPF1Q9H9Y2 349 aaKnown RBP15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 KIF5CO60282 957 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 KPNA6O60684 536 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 CLTAP09496 248 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 NOP14P78316 857 aaKnown RBP15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 TAF3Q5VWG9 929 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 C1orf127Q8N9H9 656 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 PXYLP1Q8TE99 480 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 SH3TC2Q8TF17 1288 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 U2AF1L4Q8WU68 220 aaKnown RBP15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 XYLT2Q9H1B5 865 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 SNTG2Q9NY99 539 aa15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 NOC2LQ9Y3T9 749 aaKnown RBP15.18■□□□□ 0.02
HMGCS2-201ENST00000369406 TMCO5BA8MYB1 307 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 ASS1P00966 412 aaKnown RBP15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 CHRNA1P02708 482 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 HOXD10P28358 340 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 MFAP3P55082 362 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 GCNT1Q02742 428 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 SERINC5Q86VE9 423 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 FAM228AQ86W67 206 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 ZMAT2Q96NC0 199 aaKnown RBP15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 SPC25Q9HBM1 224 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 TRMT13Q9NUP7 481 aaKnown RBP15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 BZW2Q9Y6E2 419 aaKnown RBP15.17■□□□□ 0.02
HMGCS2-201ENST00000369406 CDY2AQ9Y6F7 541 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms