RNA–Protein interactions for RNA: ENST00000368356.8

FDPS-202, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 2 BASIC

Gene FDPS, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-202ENST00000368356 PDE11AQ9HCR9 933 aa17.05■□□□□ 0.32
FDPS-202ENST00000368356 C1orf112Q9NSG2 853 aa17.05■□□□□ 0.32
FDPS-202ENST00000368356 INTS13Q9NVM9 706 aa17.05■□□□□ 0.32
FDPS-202ENST00000368356 HES2Q9Y543 173 aa17.05■□□□□ 0.32
FDPS-202ENST00000368356 PCDHA11Q9Y5I1 949 aa17.05■□□□□ 0.32
FDPS-202ENST00000368356 TDRD15B5MCY1 1934 aaKnown RBP17.05■□□□□ 0.32
FDPS-202ENST00000368356 PMM2O15305 246 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 STX10O60499 249 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 TPM3P06753 285 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 GTF2H1P32780 548 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 ZNF75DP51815 510 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 YARSP54577 528 aaKnown RBP17.04■□□□□ 0.32
FDPS-202ENST00000368356 DEFB103AP81534 67 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 HACE1Q8IYU2 909 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 LINC01599Q8WXQ3 324 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 TSPAN18Q96SJ8 248 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 TOPORSQ9NS56 1045 aaPredicted RBP17.04■□□□□ 0.32
FDPS-202ENST00000368356 SZT2Q5T011 3432 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 LACTBL1A8MY62 500 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 ENPP3O14638 875 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 P4HA2O15460 535 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 TEX33O43247 280 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 RECQL4O94761 1208 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 ADCY5O95622 1261 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 EOMESO95936 686 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 TRIM49P0CI25 452 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 TRIM49CP0CI26 452 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 PBX2P40425 430 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 FMO5P49326 533 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 AP3M2P53677 418 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 PPP3CAQ08209 521 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 ZNF598Q86UK7 904 aaKnown RBP17.04■□□□□ 0.32
FDPS-202ENST00000368356 ECHDC2Q86YB7 292 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 NT5DC4Q86YG4 428 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 WDR49Q8IV35 697 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 DEFB123Q8N688 67 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 SNX27Q96L92 541 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 POP1Q99575 1024 aaKnown RBP17.04■□□□□ 0.32
FDPS-202ENST00000368356 CGRRF1Q99675 332 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
FDPS-202ENST00000368356 A0A1W2PQC6 194 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 GTPBP10A4D1E9 387 aaKnown RBP17.03■□□□□ 0.32
FDPS-202ENST00000368356 GJB5O95377 273 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 DLATP10515 647 aaKnown RBP17.03■□□□□ 0.32
FDPS-202ENST00000368356 ITGA4P13612 1032 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 ATF7P17544 494 aaPredicted RBP17.03■□□□□ 0.32
FDPS-202ENST00000368356 TNNI1P19237 187 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 AKAP5P24588 427 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 PBX1P40424 430 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 RABGGTBP53611 331 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 UBXN1Q04323 297 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 FKBP15Q5T1M5 1219 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.323e-10■■■■□ 21.1
FDPS-202ENST00000368356 C15orf39Q6ZRI6 1047 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 ZNF516Q92618 1163 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 ERGIC2Q96RQ1 377 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 ZBED2Q9BTP6 218 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
FDPS-202ENST00000368356 TMEM8AQ9HCN3 771 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 UBN1Q9NPG3 1134 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 CNTN3Q9P232 1028 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 GIT1Q9Y2X7 761 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 DERAQ9Y315 318 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 C2CD2Q9Y426 696 aa17.03■□□□□ 0.32
FDPS-202ENST00000368356 PTPRJQ12913 1337 aa17.02■□□□□ 0.32
FDPS-202ENST00000368356 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.02■□□□□ 0.31
FDPS-202ENST00000368356 PES1O00541 588 aaKnown RBP17.02■□□□□ 0.31
FDPS-202ENST00000368356 TLL1O43897 1013 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 N4BP1O75113 896 aaKnown RBP17.02■□□□□ 0.31
FDPS-202ENST00000368356 C4BPAP04003 597 aaKnown RBP17.02■□□□□ 0.31
FDPS-202ENST00000368356 CBWD6Q4V339 395 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 CBWD3Q5JTY5 395 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 CBWD5Q5RIA9 395 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 KRT39Q6A163 491 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 AGMOQ6ZNB7 445 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 SV2AQ7L0J3 742 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 Q7L0L9 218 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 EFCAB13Q8IY85 973 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 FAM212AQ96EL1 285 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 TMEM117Q9H0C3 514 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 SLC28A3Q9HAS3 691 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 PARP2Q9UGN5 583 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 COQ4Q9Y3A0 265 aa17.02■□□□□ 0.31
FDPS-202ENST00000368356 KCNE1P15382 129 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 CDC25BP30305 580 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 GCLMP48507 274 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 MXI1P50539 228 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 ZBTB6Q15916 424 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 DUOXA2Q1HG44 320 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 ZACNQ401N2 412 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.01■□□□□ 0.31
FDPS-202ENST00000368356 CRIPAKQ8N1N5 446 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 APOL6Q9BWW8 343 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 NKX2-4Q9H2Z4 354 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 TMEM161AQ9NX61 479 aa17.01■□□□□ 0.31
FDPS-202ENST00000368356 YBX2Q9Y2T7 364 aaKnown RBP17.01■□□□□ 0.31
FDPS-202ENST00000368356 FNDC1Q4ZHG4 1894 aaPredicted RBP17.01■□□□□ 0.31
FDPS-202ENST00000368356 MEIS3P2A8K0S8 358 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms