RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 FAM117BQ6P1L5 589 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 FRMD5Q7Z6J6 570 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 LPAR1Q92633 364 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 ATXN7L3BQ96GX2 97 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 TEX13BQ9BXU2 312 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 SLC16A3O15427 465 aaKnown RBP16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 DGAT1O75907 488 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 LRG1P02750 347 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 TCF3P15923 654 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 CDH2P19022 906 aaPredicted RBP16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 PHKG1Q16816 387 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 UGP2Q16851 508 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 PLEKHM3Q6ZWE6 761 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 LATS2Q9NRM7 1088 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 SPATA31A3Q5VYP0 1347 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 NECTIN1Q15223 517 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 P3H1Q32P28 736 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 C18orf8Q96DM3 657 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 CATSPERBQ9H7T0 1116 aa16.53■□□□□ 0.24
NUCKS1-201ENST00000367142 ARSEP51690 589 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 LRRC74AQ0VAA2 488 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 BEND6Q5SZJ8 279 aaPredicted RBP16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 CCDC137Q6PK04 289 aaKnown RBP16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 RCOR2Q8IZ40 523 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 ZNF555Q8NEP9 628 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 AGPAT1Q99943 283 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 ZNF556Q9HAH1 456 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 POLD4Q9HCU8 107 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 H2AFY2Q9P0M6 372 aaPredicted RBP16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 DCTN4Q9UJW0 460 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 CYP2B6P20813 491 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 ZNF507Q8TCN5 953 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 CLMNQ96JQ2 1002 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 CNOT7Q9UIV1 285 aaKnown RBP16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 SSTR3P32745 418 aaPredicted RBP16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 CUL3Q13618 768 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 GLYCTKQ8IVS8 523 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 ICA1LQ8NDH6 482 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 PLEKHA8Q96JA3 519 aa16.52■□□□□ 0.24
NUCKS1-201ENST00000367142 IL18RAPO95256 599 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 GUCA1CO95843 209 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 RFC5P40937 340 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 NCALDP61601 193 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 SEMA3FQ13275 785 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 SLC7A14Q8TBB6 771 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 STOML1Q9UBI4 398 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 ADGRL3Q9HAR2 1447 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 RTN2O75298 545 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 HARS2P49590 506 aaKnown RBP16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 RGS4P49798 205 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 FAM161BQ96MY7 647 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 GOLPH3LQ9H4A5 285 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.23
NUCKS1-201ENST00000367142 SLC25A27O95847 323 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 TFRCP02786 760 aaKnown RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 CETPP11597 493 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 CEP55Q53EZ4 464 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 ARHGAP18Q8N392 663 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 TEX9Q8N6V9 391 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 RFFLQ8WZ73 363 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 PABPC5Q96DU9 382 aaKnown RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 LARGE1O95461 756 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 TRIM49P0CI25 452 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 TRIM49CP0CI26 452 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 BRAFP15056 766 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 NEK2P51955 445 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 TRIM60Q495X7 471 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 ZNF280CQ8ND82 737 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 USP33Q8TEY7 942 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 SEPT1Q8WYJ6 367 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 NSMCE4AQ9NXX6 385 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 GCC2Q8IWJ2 1684 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 CPT1AP50416 773 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 TP53BP2Q13625 1128 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 CD274Q9NZQ7 290 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 H0Y3Z8 333 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 ATP1A3P13637 1013 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 ACADSBP45954 432 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 SESN2P58004 480 aaPredicted RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 DHX34Q14147 1143 aaKnown RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 HIF1AQ16665 826 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 GUF1Q8N442 669 aaKnown RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 PTPRN2Q92932 1015 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 CHAMP1Q96JM3 812 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 RSPH10B2B2RC85 870 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 RSPH10BP0C881 870 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 IMPDH2P12268 514 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 PCSK1P29120 753 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 OR1G1P47890 313 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 COBLL1Q53SF7 1204 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 RARS2Q5T160 578 aaKnown RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 PTRHD1Q6GMV3 140 aaKnown RBP16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 CHMP1BQ7LBR1 199 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 OXER1Q8TDS5 423 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 SCFD2Q8WU76 684 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 CYP4F11Q9HBI6 524 aa16.51■□□□□ 0.23
NUCKS1-201ENST00000367142 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms