RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 FAM102AQ5T9C2 384 aaPredicted RBP17.59■□□□□ 0.41
NID1-202ENST00000366595 USP17L2Q6R6M4 530 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 NBPF15Q8N660 670 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 C1orf54Q8WWF1 131 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 FANCEQ9HB96 536 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 PLXNC1O60486 1568 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 HMGXB3Q12766 1538 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 TTC26A0AVF1 554 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 TK2O00142 265 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 XPO1O14980 1071 aaKnown RBP17.59■□□□□ 0.41
NID1-202ENST00000366595 ZNF200P98182 395 aaPredicted RBP17.59■□□□□ 0.41
NID1-202ENST00000366595 LRRC36Q1X8D7 754 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 FRMD8Q9BZ67 464 aaPredicted RBP17.59■□□□□ 0.41
NID1-202ENST00000366595 CLASP2O75122 1294 aaKnown RBP17.59■□□□□ 0.41
NID1-202ENST00000366595 ATP1A1P05023 1023 aaKnown RBP17.59■□□□□ 0.41
NID1-202ENST00000366595 CDK17Q00537 523 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 SLC27A3Q5K4L6 730 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 SCN4BQ8IWT1 228 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 VPS33BQ9H267 617 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 AMACRQ9UHK6 382 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 RNF103O00237 685 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 BBOX1O75936 387 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 LRRC74AQ0VAA2 488 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 NLGN1Q8N2Q7 840 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 RFWD2Q8NHY2 731 aa17.59■□□□□ 0.41
NID1-202ENST00000366595 UTP6Q9NYH9 597 aaKnown RBP17.59■□□□□ 0.41
NID1-202ENST00000366595 TRPC5OSA6NMA1 111 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 TNPO2O14787 897 aaKnown RBP17.58■□□□□ 0.41
NID1-202ENST00000366595 STX5Q13190 355 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 C16orf72Q14CZ0 275 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 ANO4Q32M45 955 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 FGD2Q7Z6J4 655 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 LCORLQ8N3X6 602 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 GALNT4Q8N4A0 578 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 PIK3R5Q8WYR1 880 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 RBM15Q96T37 977 aaKnown RBP eCLIP17.58■□□□□ 0.41
NID1-202ENST00000366595 GRID1Q9ULK0 1009 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 DPYSL4O14531 572 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 TRIM49P0CI25 452 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 TRIM49CP0CI26 452 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 SPDYAQ5MJ70 313 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 FMR1NBQ8N0W7 255 aaPredicted RBP17.58■□□□□ 0.41
NID1-202ENST00000366595 CYFIP2Q96F07 1278 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 CNDP1Q96KN2 507 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 ZNF560Q96MR9 790 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 OSBPL8Q9BZF1 889 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 ARHGEF38Q9NXL2 777 aa17.58■□□□□ 0.41
NID1-202ENST00000366595 ZC3H7BQ9UGR2 993 aaKnown RBP17.58■□□□□ 0.41
NID1-202ENST00000366595 PPEF1O14829 653 aaPredicted RBP17.58■□□□□ 0.4
NID1-202ENST00000366595 PLOD1Q02809 727 aaPredicted RBP17.58■□□□□ 0.4
NID1-202ENST00000366595 NECTIN1Q15223 517 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 AGR3Q8TD06 166 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 PGBD4Q96DM1 585 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 FAM213AQ9BRX8 229 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 IMPAD1Q9NX62 359 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 DTNAQ9Y4J8 743 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 DYNLL1P63167 89 aaKnown RBP17.58■□□□□ 0.4
NID1-202ENST00000366595 GTF2H3Q13889 308 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
NID1-202ENST00000366595 TMEM179Q6ZVK1 233 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 CLMNQ96JQ2 1002 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 ANKRD27Q96NW4 1050 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 AGPAT1Q99943 283 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 TRIM49BA6NDI0 452 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 SNRPAP09012 282 aaKnown RBP17.58■□□□□ 0.4
NID1-202ENST00000366595 RALAP11233 206 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 KCNA6P17658 529 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 HPCAP84074 193 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 MBD2Q9UBB5 411 aa17.58■□□□□ 0.4
NID1-202ENST00000366595 TRIM24O15164 1050 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 CYTH3O43739 400 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 EIF2AK2P19525 551 aaKnown RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 LSP1P33241 339 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 CCDC60Q8IWA6 550 aaPredicted RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 KRT78Q8N1N4 520 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 ARHGEF26Q96DR7 871 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 MRPL48Q96GC5 212 aaKnown RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 PDLIM2Q96JY6 352 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 DYRK4Q9NR20 520 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 NFKBIL1Q9UBC1 381 aaPredicted RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 HDAC6Q9UBN7 1215 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 SSU72P8A0A1W2PR75 194 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 SLC16A3O15427 465 aaKnown RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 FAM45BPQ6NSW5 357 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 URGCPQ8TCY9 931 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 UBAP1Q9NZ09 502 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 AIM2O14862 343 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 ATP9BO43861 1147 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 UBTFL6P0CB48 400 aaPredicted RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 PSMA4P25789 261 aaKnown RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 UNC5CLQ8IV45 518 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 SCFD2Q8WU76 684 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 KLHL25Q9H0H3 589 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 EPC1Q9H2F5 836 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 PCDHA6Q9UN73 950 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 PCDHA8Q9Y5H6 950 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 RGS4P49798 205 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 MTMR1Q13613 665 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 USP10Q14694 798 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms