RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CYP3A7-CYP3A51PA0A087WV96 503 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 IQCA1LA6NCM1 817 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 E9PMD0 336 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 SMIM24O75264 130 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 DCTN3O75935 186 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 ICAM1P05362 532 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 TPBGLP0DKB5 382 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 CYP3A7P24462 503 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 POLGP54098 1239 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-201ENST00000361909 SLC12A3P55017 1021 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 LRRC14Q15048 493 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 SLC5A9Q2M3M2 681 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 DNAAF5Q86Y56 855 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 GLYCTKQ8IVS8 523 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 STARD13Q9Y3M8 1113 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 IGSF9BQ9UPX0 1349 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 DPPA5A6NC42 116 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 AKAP3O75969 853 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 RTN3O95197 1032 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-201ENST00000361909 NR3C1P04150 777 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 CDC25CP30307 473 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 ALDH3A1P30838 453 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 COILP38432 576 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-201ENST00000361909 RAD23BP54727 409 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 CAV1Q03135 178 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 SF3A3Q12874 501 aaKnown RBP eCLIP20.31■□□□□ 0.84
CMTM3-201ENST00000361909 THEMIS2Q5TEJ8 643 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 TCERG1LQ5VWI1 586 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 CCDC174Q6PII3 467 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 SYDE1Q6ZW31 735 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-201ENST00000361909 ECHDC2Q86YB7 292 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 MGARPQ8TDB4 240 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 UTP4Q969X6 686 aaKnown RBP20.31■□□□□ 0.84
CMTM3-201ENST00000361909 WNT8AQ9H1J5 351 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 CTTNBP2NLQ9P2B4 639 aa20.31■□□□□ 0.84
CMTM3-201ENST00000361909 GSTA2P09210 222 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 COPB2P35606 906 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 ZNF211Q13398 564 aaPredicted RBP20.3■□□□□ 0.84
CMTM3-201ENST00000361909 IRGCQ6NXR0 463 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 MTHFD1LQ6UB35 978 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 LDHDQ86WU2 507 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 TRAPPC9Q96Q05 1148 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 AFG3L2Q9Y4W6 797 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 ALG6Q9Y672 507 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 USH1CQ9Y6N9 552 aa20.3■□□□□ 0.84
CMTM3-201ENST00000361909 TRAFD1O14545 582 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-201ENST00000361909 BRAFP15056 766 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 MAN1A1P33908 653 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 SREBF1P36956 1147 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 PEX5P50542 639 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 IL9RQ01113 521 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 TTC27Q6P3X3 843 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 ADAT2Q7Z6V5 191 aaKnown RBP20.29■□□□□ 0.84
CMTM3-201ENST00000361909 RIBC1Q8N443 379 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-201ENST00000361909 MBOAT7Q96N66 472 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 MKNK1Q9BUB5 465 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 RPAP3Q9H6T3 665 aaPredicted RBP20.29■□□□□ 0.84
CMTM3-201ENST00000361909 SLC38A10Q9HBR0 1119 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 KCNK9Q9NPC2 374 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 FZD1Q9UP38 647 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 ADM5C9JUS6 153 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 MAGEB2O15479 319 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 MTA2O94776 668 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 ECEL1O95672 775 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 GNAT1P11488 350 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 ABCB4P21439 1286 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 TNFAIP3P21580 790 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 MGAT5Q09328 741 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 LONRF1Q17RB8 773 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 CGB2Q6NT52 195 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 CCDC105Q8IYK2 499 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 SAMD3Q8N6K7 520 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 TEKT4Q8WW24 435 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.29■□□□□ 0.84
CMTM3-201ENST00000361909 PAPPA2Q9BXP8 1791 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 SMCHD1A6NHR9 2005 aa20.29■□□□□ 0.84
CMTM3-201ENST00000361909 ZNF536O15090 1300 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 MAPK13O15264 365 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 POLR2MP0CAP2 368 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 ITIH2P19823 946 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 IREB2P48200 963 aaKnown RBP20.28■□□□□ 0.84
CMTM3-201ENST00000361909 KIF22Q14807 665 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 SH3D19Q5HYK7 790 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 TRIM68Q6AZZ1 485 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 RGS9BPQ6ZS82 235 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 VSIG1Q86XK7 387 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 RBBP8NLQ8NC74 664 aaPredicted RBP20.28■□□□□ 0.84
CMTM3-201ENST00000361909 KCNV2Q8TDN2 545 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 ARHGEF26Q96DR7 871 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 TRIM33Q9UPN9 1127 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 ASTN1O14525 1302 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 AP1G2O75843 785 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 CYP3A4P08684 503 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 ARHGAP4P98171 946 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 ARSHQ5FYA8 562 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 ANKRD42Q8N9B4 389 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 ANKLE1Q8NAG6 615 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 UHMK1Q8TAS1 419 aaKnown RBP20.28■□□□□ 0.84
CMTM3-201ENST00000361909 DNAJC9Q8WXX5 260 aa20.28■□□□□ 0.84
CMTM3-201ENST00000361909 FAM210AQ96ND0 272 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms