RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SORBS3O60504 671 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 CALCAP01258 141 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 KRT5P13647 590 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 ATF2P15336 505 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 COILP38432 576 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-201ENST00000361716 GCLMP48507 274 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 POU5F1Q01860 360 aaKnown RBP13.49□□□□□ -0.25
VAMP1-201ENST00000361716 PPP2R5EQ16537 467 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 ACSBG2Q5FVE4 666 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 PHLDB3Q6NSJ2 640 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 CCDC174Q6PII3 467 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 CATSPER3Q86XQ3 398 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 HAS1Q92839 578 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 MPP4Q96JB8 637 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 PHF12Q96QT6 1004 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 TUBGCP5Q96RT8 1024 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 CENPKQ9BS16 269 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 ANO3Q9BYT9 981 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 TXLNGYQ9BZA5 131 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 CNOT7Q9UIV1 285 aaKnown RBP13.49□□□□□ -0.25
VAMP1-201ENST00000361716 SUPT3HO75486 399 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 HAUS5O94927 633 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 CETPP11597 493 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 CCNB1P14635 433 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-201ENST00000361716 RTP1P59025 263 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 SPARCL1Q14515 664 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 RNF43Q68DV7 783 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 FAM178BQ8IXR5 827 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 NRG4Q8WWG1 115 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 DMAP1Q9NPF5 467 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-201ENST00000361716 RABGAP1Q9Y3P9 1069 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 PGM3O95394 542 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 SPATA31D3P0C874 917 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 BTNL9Q6UXG8 535 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 SPATA31D4Q6ZUB0 917 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 SLC30A5Q8TAD4 765 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 SLC20A1Q8WUM9 679 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 CEP63Q96MT8 703 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 MTMR9Q96QG7 549 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 RUSC1Q9BVN2 902 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 FBXO6Q9NRD1 293 aaPredicted RBP13.49□□□□□ -0.25
VAMP1-201ENST00000361716 HEY2Q9UBP5 337 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 MYH4Q9Y623 1939 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
VAMP1-201ENST00000361716 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 GOLGA8SH3BPF8 625 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 GOLGA8MH3BSY2 632 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 TTLL1O95922 423 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 GSTA2P09210 222 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 TROVE2P10155 538 aaKnown RBP eCLIP13.48□□□□□ -0.25
VAMP1-201ENST00000361716 LMNB1P20700 586 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 PTPN4P29074 926 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 PGM1P36871 562 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 KDSRQ06136 332 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SLC34A1Q06495 639 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 QRICH1Q2TAL8 776 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 ZCWPW2Q504Y3 356 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 ZFAND2BQ8WV99 257 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 WDR60Q8WVS4 1066 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SLC7A6OSQ96CW6 309 aaPredicted RBP13.48□□□□□ -0.25
VAMP1-201ENST00000361716 BICD1Q96G01 975 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 FAM84AQ96KN4 292 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SERPINB12Q96P63 405 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 PHACTR1Q9C0D0 580 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 COG5Q9UP83 839 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 STXBP5LQ9Y2K9 1186 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 PNMA6FA0A0J9YX94 578 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 M0R2N6 131 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 WFS1O76024 890 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 LMNAP02545 664 aaKnown RBP13.48□□□□□ -0.25
VAMP1-201ENST00000361716 WDR4P57081 412 aaKnown RBP13.48□□□□□ -0.25
VAMP1-201ENST00000361716 PLCB3Q01970 1234 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SGSM1Q2NKQ1 1148 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 C4orf50Q6ZRC1 276 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SPATA24Q86W54 205 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SYNGAP1Q96PV0 1343 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 NYXQ9GZU5 481 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 TRABDQ9H4I3 376 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 CCDC134Q9H6E4 229 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 AKAP11Q9UKA4 1901 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.48□□□□□ -0.25
VAMP1-201ENST00000361716 NID2Q14112 1375 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 KDM3AQ9Y4C1 1321 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 TISP43B9A030 160 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 LYNP07948 512 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 MYBPC3Q14896 1274 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 PARP6Q2NL67 630 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 WASHC2DQ5SRD0 308 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 C6orf163Q5TEZ5 329 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 KAZNQ674X7 775 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 TRIM42Q8IWZ5 723 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 ARL10Q8N8L6 244 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 CADM1Q9BY67 442 aaKnown RBP13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SMYD3Q9H7B4 428 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 SAYSD1Q9NPB0 183 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 MTMR4Q9NYA4 1195 aa13.48□□□□□ -0.25
VAMP1-201ENST00000361716 PSMG1O95456 288 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms