RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TADA2BQ86TJ2 420 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 PPP1R9AQ9ULJ8 1098 aa19.64■□□□□ 0.73
CLIP2-202ENST00000361545 PPP1R12AO14974 1030 aaPredicted RBP19.63■□□□□ 0.73
CLIP2-202ENST00000361545 EXTL3O43909 919 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 CLCN3P51790 818 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 SZRD1Q7Z422 152 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 CCNYL1Q8N7R7 359 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 TTC8Q8TAM2 541 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 EPS15L1Q9UBC2 864 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 ATP1A1P05023 1023 aaKnown RBP19.63■□□□□ 0.73
CLIP2-202ENST00000361545 EDRF1Q3B7T1 1238 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 PDCD7Q8N8D1 485 aaKnown RBP19.63■□□□□ 0.73
CLIP2-202ENST00000361545 UBA3Q8TBC4 463 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 MIPOL1Q8TD10 442 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 SPATA17Q96L03 361 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 AGAP3Q96P47 875 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 DDX50Q9BQ39 737 aaKnown RBP19.63■□□□□ 0.73
CLIP2-202ENST00000361545 HAUS8Q9BT25 410 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 IL1R1P14778 569 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 GCLCP48506 637 aaPredicted RBP19.63■□□□□ 0.73
CLIP2-202ENST00000361545 RNF135Q8IUD6 432 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 HVCN1Q96D96 273 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 RNPC3Q96LT9 517 aaKnown RBP19.63■□□□□ 0.73
CLIP2-202ENST00000361545 POLR3CQ9BUI4 534 aaPredicted RBP19.63■□□□□ 0.73
CLIP2-202ENST00000361545 RUSC1Q9BVN2 902 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 NDFIP2Q9NV92 336 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 GTSE1Q9NYZ3 720 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 NFIBO00712 420 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 ALDH1A1P00352 501 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 CAV1Q03135 178 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 EPC2Q52LR7 807 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 MED15Q96RN5 788 aa19.63■□□□□ 0.73
CLIP2-202ENST00000361545 ESRRBO95718 433 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 CYP11B2P19099 503 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 ARSEP51690 589 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 GALCP54803 685 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 RASSF3Q86WH2 238 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 CRLF3Q8IUI8 442 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 USP33Q8TEY7 942 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 MROH8Q9H579 483 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 PXDNQ92626 1479 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 A0A0G2JND7 137 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 SLC26A4O43511 780 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 OPHN1O60890 802 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 SLC35G2Q8TBE7 412 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 N4BP2L2Q92802 583 aaPredicted RBP19.62■□□□□ 0.73
CLIP2-202ENST00000361545 EGFL8Q99944 293 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 EIF3DO15371 548 aaKnown RBP eCLIP19.62■□□□□ 0.73
CLIP2-202ENST00000361545 PMS2P54278 862 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 KLHL38Q2WGJ6 581 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 IZUMO3Q5VZ72 239 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 FBXO38Q6PIJ6 1188 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 NUDT18Q6ZVK8 323 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 HPDLQ96IR7 371 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 TMEM117Q9H0C3 514 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 MLXIPLQ9NP71 852 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 ITSN1Q15811 1721 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 ITGB3P05106 788 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 TAL1P17542 331 aaPredicted RBP19.62■□□□□ 0.73
CLIP2-202ENST00000361545 PCSK1P29120 753 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 RDM1Q8NG50 284 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 ULK4Q96C45 1275 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 ATXN7L3BQ96GX2 97 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 A0A1B0GTH6 734 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 HMGB1P1B2RPK0 211 aaPredicted RBP19.62■□□□□ 0.73
CLIP2-202ENST00000361545 KCNN4O15554 427 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 ATN1P54259 1190 aaPredicted RBP19.62■□□□□ 0.73
CLIP2-202ENST00000361545 SLC18A3Q16572 532 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 ANO4Q32M45 955 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 DCP1BQ8IZD4 617 aaKnown RBP19.62■□□□□ 0.73
CLIP2-202ENST00000361545 TMEM8AQ9HCN3 771 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 TBX20Q9UMR3 447 aa19.62■□□□□ 0.73
CLIP2-202ENST00000361545 SPARCL1Q14515 664 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 AMHR2Q16671 573 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 FAM47EQ6ZV65 393 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 KLHL29Q96CT2 875 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 SENP7Q9BQF6 1050 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 GLIS2Q9BZE0 524 aaPredicted RBP19.61■□□□□ 0.73
CLIP2-202ENST00000361545 COPS2P61201 443 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 TTC23LQ6PF05 361 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 PITPNM2Q9BZ72 1349 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 SESN2P58004 480 aaPredicted RBP19.61■□□□□ 0.73
CLIP2-202ENST00000361545 PABPC5Q96DU9 382 aaKnown RBP19.61■□□□□ 0.73
CLIP2-202ENST00000361545 EHD4Q9H223 541 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 WDR35Q9P2L0 1181 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 LRRIQ1Q96JM4 1722 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 CCDC195A0A1B0GUA6 201 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 GNL1P36915 607 aaPredicted RBP19.61■□□□□ 0.73
CLIP2-202ENST00000361545 KIZQ2M2Z5 673 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 SYT2Q8N9I0 419 aaPredicted RBP19.61■□□□□ 0.73
CLIP2-202ENST00000361545 SNF8Q96H20 258 aa19.61■□□□□ 0.73
CLIP2-202ENST00000361545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.61■□□□□ 0.733e-7■■□□□ 13.3
CLIP2-202ENST00000361545 DNAJC6O75061 913 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 SH3TC2Q8TF17 1288 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 SNX19Q92543 992 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 SH3KBP1Q96B97 665 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 KCNQ5Q9NR82 932 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 AMACRQ9UHK6 382 aa19.6■□□□□ 0.73
CLIP2-202ENST00000361545 RSPH10B2B2RC85 870 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms