RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ITGA4P13612 1032 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 TNFAIP2Q03169 654 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 PRPSAP1Q14558 356 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 TMEM139Q8IV31 216 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 SLC10A4Q96EP9 437 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 RCCD1A6NED2 376 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 COILP38432 576 aaPredicted RBP17.31■□□□□ 0.36
SCAF1-201ENST00000360565 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
SCAF1-201ENST00000360565 TNFRSF25Q93038 417 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 MCEEQ96PE7 176 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 AP5M1Q9H0R1 490 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 TLK1Q9UKI8 766 aa17.31■□□□□ 0.36
SCAF1-201ENST00000360565 GSTA1P08263 222 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 GSTA2P09210 222 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 AP3M2P53677 418 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 ATG16L1Q676U5 607 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 PTF1AQ7RTS3 328 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 ACTRT1Q8TDG2 376 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 SLC20A1Q8WUM9 679 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 LCMT1Q9UIC8 334 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 IGSF9BQ9UPX0 1349 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 GOLGA8RI6L899 631 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 OPHN1O60890 802 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 CORO7P57737 925 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 GPR162Q16538 588 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 TUBB6Q9BUF5 446 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 PABPC3Q9H361 631 aaKnown RBP17.3■□□□□ 0.36
SCAF1-201ENST00000360565 TRABDQ9H4I3 376 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 F5H423 210 aaPredicted RBP17.3■□□□□ 0.36
SCAF1-201ENST00000360565 NFIBO00712 420 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 TTLL4Q14679 1199 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 SYCP2LQ5T4T6 812 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 SYDE1Q6ZW31 735 aaPredicted RBP17.3■□□□□ 0.36
SCAF1-201ENST00000360565 IRF2BP1Q8IU81 584 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 DCLK2Q8N568 766 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 GMCL1P1Q8NEA9 526 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 ALG13Q9NP73 1137 aaKnown RBP17.3■□□□□ 0.36
SCAF1-201ENST00000360565 PFDN4Q9NQP4 134 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 PIK3R2O00459 728 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 ZBTB39O15060 712 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 GYG2O15488 501 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 MIIPQ5JXC2 388 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 SPATA21Q7Z572 469 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 RCOR2Q8IZ40 523 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 HAS1Q92839 578 aa17.3■□□□□ 0.36
SCAF1-201ENST00000360565 POP1Q99575 1024 aaKnown RBP17.3■□□□□ 0.36
SCAF1-201ENST00000360565 TOPORSQ9NS56 1045 aaPredicted RBP17.3■□□□□ 0.36
SCAF1-201ENST00000360565 TMEM120BA0PK00 339 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 EML1O00423 815 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 RALAP11233 206 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 ITGA8P53708 1063 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 CRLF3Q8IUI8 442 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 SEPT1Q8WYJ6 367 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 DEFB129Q9H1M3 183 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 ZFP69BQ9UJL9 534 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 NEU2Q9Y3R4 380 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 RGL2O15211 777 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 MAFGO15525 162 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 WEE2P0C1S8 567 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 EIF3EP60228 445 aaKnown RBP17.29■□□□□ 0.36
SCAF1-201ENST00000360565 KCNA1Q09470 495 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 KDM7AQ6ZMT4 941 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 BZW1Q7L1Q6 419 aaKnown RBP17.29■□□□□ 0.36
SCAF1-201ENST00000360565 PARP9Q8IXQ6 854 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 C4orf33Q8N1A6 199 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 ATG4AQ8WYN0 398 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 ECT2Q9H8V3 914 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 CYP26B1Q9NR63 512 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 GTPBP10A4D1E9 387 aaKnown RBP17.29■□□□□ 0.36
SCAF1-201ENST00000360565 MAP2K7O14733 419 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 NCF2P19878 526 aaPredicted RBP17.29■□□□□ 0.36
SCAF1-201ENST00000360565 SMAD1Q15797 465 aaKnown RBP17.29■□□□□ 0.36
SCAF1-201ENST00000360565 LRRC55Q6ZSA7 311 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 SAMD7Q7Z3H4 446 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 MCUQ8NE86 351 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 MYCBPAPQ8TBZ2 947 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 NUF2Q9BZD4 464 aa17.29■□□□□ 0.36
SCAF1-201ENST00000360565 NPTX2P47972 431 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 SNRPFP62306 86 aaKnown RBP17.28■□□□□ 0.36
SCAF1-201ENST00000360565 ROR1Q01973 937 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 TAP1Q03518 808 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 TAS1R2Q8TE23 839 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 FBXO41Q8TF61 875 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 SLC13A1Q9BZW2 595 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 DHX35Q9H5Z1 703 aaKnown RBP17.28■□□□□ 0.36
SCAF1-201ENST00000360565 KCNQ5Q9NR82 932 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 SLITRK3O94933 977 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 FGRP09769 529 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 CDR2Q01850 454 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 SEZ6Q53EL9 994 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 WDR75Q8IWA0 830 aaKnown RBP17.28■□□□□ 0.36
SCAF1-201ENST00000360565 NKX2-3Q8TAU0 364 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 MYOZ2Q9NPC6 264 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 HAUS2Q9NVX0 235 aa17.28■□□□□ 0.36
SCAF1-201ENST00000360565 PBX1P40424 430 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms