RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 NT5C1BQ96P26 610 aa18.42■□□□□ 0.54
TPM1-205ENST00000357980 EIF2AQ9BY44 585 aaKnown RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 PIN4Q9Y237 131 aaKnown RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 NOC2LQ9Y3T9 749 aaKnown RBP18.42■□□□□ 0.54
TPM1-205ENST00000357980 PDCD11Q14690 1871 aaKnown RBP18.41■□□□□ 0.54
TPM1-205ENST00000357980 MROH7Q68CQ1 1323 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 CTSHP09668 335 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 STAT1P42224 750 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 ARID5AQ03989 594 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 MTFR1Q15390 333 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 DUOXA2Q1HG44 320 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 TRIM71Q2Q1W2 868 aaKnown RBP18.41■□□□□ 0.54
TPM1-205ENST00000357980 NYAP1Q6ZVC0 841 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 KAT5Q92993 513 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 CCDC42Q96M95 316 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 PI4K2AQ9BTU6 479 aa18.41■□□□□ 0.54
TPM1-205ENST00000357980 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.41■□□□□ 0.54
TPM1-205ENST00000357980 LACTBL1A8MY62 500 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 EIF3CLB5ME19 914 aaKnown RBP18.4■□□□□ 0.54
TPM1-205ENST00000357980 RBAK-RBAKDNI3L0D1 243 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 LCA5LO95447 670 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 THPOP40225 353 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 KIF11P52732 1056 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 KLHL30Q0D2K2 578 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 ARHGAP44Q17R89 818 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 TRAPPC11Q7Z392 1133 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 PPM1KQ8N3J5 372 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 TATDN2Q93075 761 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 ACAP3Q96P50 834 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 EIF3CQ99613 913 aaKnown RBP18.4■□□□□ 0.54
TPM1-205ENST00000357980 ASB7Q9H672 318 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 STARD7Q9NQZ5 370 aa18.4■□□□□ 0.54
TPM1-205ENST00000357980 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
TPM1-205ENST00000357980 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.54
TPM1-205ENST00000357980 KBTBD13C9JR72 458 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 DNM1LO00429 736 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 ZNF263O14978 683 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 EVI5O60447 810 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 NFICP08651 508 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 FERP16591 822 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 TFAMQ00059 246 aaKnown RBP18.39■□□□□ 0.54
TPM1-205ENST00000357980 GCNT1Q02742 428 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 NCOA4Q13772 614 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 TDRD12Q587J7 1177 aaKnown RBP18.39■□□□□ 0.54
TPM1-205ENST00000357980 UBXN11Q5T124 520 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 SCARA3Q6AZY7 606 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 FMNL3Q8IVF7 1028 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 ELMO3Q96BJ8 720 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 C16orf45Q96MC5 204 aaPredicted RBP18.39■□□□□ 0.54
TPM1-205ENST00000357980 HAUS4Q9H6D7 363 aa18.39■□□□□ 0.54
TPM1-205ENST00000357980 FOXN3O00409 490 aaPredicted RBP18.39■□□□□ 0.53
TPM1-205ENST00000357980 GFPT2O94808 682 aa18.39■□□□□ 0.53
TPM1-205ENST00000357980 CCL5P13501 91 aa18.39■□□□□ 0.53
TPM1-205ENST00000357980 JADE1Q6IE81 842 aa18.39■□□□□ 0.53
TPM1-205ENST00000357980 SHC3Q92529 594 aa18.39■□□□□ 0.53
TPM1-205ENST00000357980 CCDC94Q9BW85 323 aaPredicted RBP18.39■□□□□ 0.53
TPM1-205ENST00000357980 C1orf112Q9NSG2 853 aa18.39■□□□□ 0.53
TPM1-205ENST00000357980 A0A0U1RQJ8 604 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 GOLGA6L9A6NEM1 432 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 PHACTR2O75167 634 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 TMEM191BP0C7N4 346 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 MFAP3P55082 362 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 PTK2Q05397 1052 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 WDR44Q5JSH3 913 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 FAM26DQ5JW98 314 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 ENOSF1Q7L5Y1 443 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 ZNF571Q7Z3V5 609 aaPredicted RBP18.38■□□□□ 0.53
TPM1-205ENST00000357980 ATRIPQ8WXE1 791 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 ANKRD36BP1Q96IX9 119 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 DEFB118Q96PH6 123 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 TRPV6Q9H1D0 765 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 NXF3Q9H4D5 531 aaKnown RBP18.38■□□□□ 0.53
TPM1-205ENST00000357980 DEF6Q9H4E7 631 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 PLEKHA5Q9HAU0 1116 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 APOBEC3GQ9HC16 384 aaKnown RBP18.38■□□□□ 0.53
TPM1-205ENST00000357980 OGDHLQ9ULD0 1010 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 NOD1Q9Y239 953 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 C2CD2Q9Y426 696 aa18.38■□□□□ 0.53
TPM1-205ENST00000357980 AKR1B10O60218 316 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 CAND2O75155 1236 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 RPS6KA5O75582 802 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 ASS1P00966 412 aaKnown RBP18.37■□□□□ 0.53
TPM1-205ENST00000357980 CST3P01034 146 aaPredicted RBP18.37■□□□□ 0.53
TPM1-205ENST00000357980 TNNC2P02585 160 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 NOP14P78316 857 aaKnown RBP18.37■□□□□ 0.53
TPM1-205ENST00000357980 SPOPLQ6IQ16 392 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 FAM71AQ8IYT1 594 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 OLIG1Q8TAK6 271 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 FAM81BQ96LP2 452 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 SYT11Q9BT88 431 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 OSBPL7Q9BZF2 842 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 SNTG2Q9NY99 539 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 ST3GAL5Q9UNP4 418 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 HES2Q9Y543 173 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 ARVCFO00192 962 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 MYCP01106 439 aaPredicted RBP18.37■□□□□ 0.53
TPM1-205ENST00000357980 KRT83P78385 493 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 CYP27A1Q02318 531 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 FBXO47Q5MNV8 452 aa18.37■□□□□ 0.53
TPM1-205ENST00000357980 CD302Q8IX05 232 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms