RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 H2AFJQ9BTM1 129 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 NPHS2Q9NP85 383 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 NPHP4O75161 1426 aaPredicted RBP16.91■□□□□ 0.3
RXRA-201ENST00000356384 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
RXRA-201ENST00000356384 ENOSF1Q7L5Y1 443 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 FMR1NBQ8N0W7 255 aaPredicted RBP16.91■□□□□ 0.3
RXRA-201ENST00000356384 C2orf69Q8N8R5 385 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 TAP1Q03518 808 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 VEPH1Q14D04 833 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 IFNEQ86WN2 208 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 SH3TC2Q8TF17 1288 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 AGPAT1Q99943 283 aa16.91■□□□□ 0.3
RXRA-201ENST00000356384 MARCOQ9UEW3 520 aaPredicted RBP16.91■□□□□ 0.3
RXRA-201ENST00000356384 PFASO15067 1338 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 PPP1R18Q6NYC8 613 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 LONP2Q86WA8 852 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 SYNDIG1Q9H7V2 258 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 HSPBP1Q9NZL4 362 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 LIMA1Q9UHB6 759 aaKnown RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 CAB39Q9Y376 341 aaPredicted RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 GSNP06396 782 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 SCP2P22307 547 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 DUOXA2Q1HG44 320 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 DDX53Q86TM3 631 aaKnown RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 ENAHQ8N8S7 591 aaPredicted RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 USP33Q8TEY7 942 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 TRIM62Q9BVG3 475 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 ARL2BPQ9Y2Y0 163 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 TBC1D4O60343 1298 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 FKBP9O95302 570 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 FCER1AP12319 257 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 CDH2P19022 906 aaPredicted RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 COPB2P35606 906 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 GRIK1P39086 918 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 TRADDQ15628 312 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 CCDC92Q53HC0 331 aaPredicted RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 FKBP9P1Q75LS8 142 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 CDR2LQ86X02 465 aaPredicted RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 STAG2Q8N3U4 1231 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 MASTLQ96GX5 879 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 ELMO2Q96JJ3 720 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 ZNF556Q9HAH1 456 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 ZNF335Q9H4Z2 1342 aaPredicted RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 ATL2Q8NHH9 583 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 USP6NLQ92738 828 aa16.9■□□□□ 0.3
RXRA-201ENST00000356384 EIF2AK1Q9BQI3 630 aaKnown RBP16.9■□□□□ 0.3
RXRA-201ENST00000356384 C16orf96A6NNT2 1141 aa16.89■□□□□ 0.3
RXRA-201ENST00000356384 CYP2E1P05181 493 aaPredicted RBP16.89■□□□□ 0.3
RXRA-201ENST00000356384 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.89■□□□□ 0.3
RXRA-201ENST00000356384 TSSK1BQ9BXA7 367 aa16.89■□□□□ 0.3
RXRA-201ENST00000356384 MRPL1Q9BYD6 325 aaKnown RBP16.89■□□□□ 0.3
RXRA-201ENST00000356384 ZC3H4Q9UPT8 1303 aaKnown RBP16.89■□□□□ 0.29
RXRA-201ENST00000356384 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 CEP152O94986 1710 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 TDP2O95551 362 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 PPP3CCP48454 512 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 SKIV2LQ15477 1246 aaKnown RBP16.89■□□□□ 0.29
RXRA-201ENST00000356384 MMP19Q99542 508 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 C3orf70A6NLC5 250 aaPredicted RBP16.89■□□□□ 0.29
RXRA-201ENST00000356384 TBL3Q12788 808 aaKnown RBP16.89■□□□□ 0.29
RXRA-201ENST00000356384 CCDC142Q17RM4 750 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 TBC1D19Q8N5T2 526 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 SPATA4Q8NEY3 305 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 EME1Q96AY2 570 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 OSBPL5Q9H0X9 879 aaPredicted RBP16.89■□□□□ 0.29
RXRA-201ENST00000356384 EXOSC4Q9NPD3 245 aaKnown RBP16.89■□□□□ 0.29
RXRA-201ENST00000356384 P3H1Q32P28 736 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 PLEKHA8Q96JA3 519 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 ZNF560Q96MR9 790 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 LRRC1Q9BTT6 524 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 TRPC7Q9HCX4 862 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 PIM2Q9P1W9 311 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 APRTP07741 180 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 TCF3P15923 654 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 NT5C2P49902 561 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 GTF2H3Q13889 308 aa16.89■□□□□ 0.29
RXRA-201ENST00000356384 DDX42Q86XP3 938 aaKnown RBP eCLIP16.89■□□□□ 0.29
RXRA-201ENST00000356384 MAP3K4Q9Y6R4 1608 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 SNAP23O00161 211 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 AKT1P31749 480 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 GRM4Q14833 912 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 ADGRF4Q8IZF3 695 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 ARMC2Q8NEN0 867 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 UTYO14607 1347 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 STX3Q13277 289 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 LONRF1Q17RB8 773 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 GUF1Q8N442 669 aaKnown RBP16.88■□□□□ 0.29
RXRA-201ENST00000356384 RNF17Q9BXT8 1623 aaKnown RBP16.88■□□□□ 0.29
RXRA-201ENST00000356384 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 RTN2O75298 545 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 CAPZA2P47755 286 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 USP10Q14694 798 aaKnown RBP16.88■□□□□ 0.29
RXRA-201ENST00000356384 QRICH1Q2TAL8 776 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 YAF2Q8IY57 180 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 APPL2Q8NEU8 664 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 IL17RAQ96F46 866 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 ARHGEF38Q9NXL2 777 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 E2F8A0AVK6 867 aa16.88■□□□□ 0.29
RXRA-201ENST00000356384 CHN1P15882 459 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms