RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 SNX1Q13596 522 aa19.47■□□□□ 0.71
SPNS3-201ENST00000355530 NBPF9Q3BBW0 867 aa19.47■□□□□ 0.71
SPNS3-201ENST00000355530 ZNF677Q86XU0 584 aa19.47■□□□□ 0.71
SPNS3-201ENST00000355530 RDM1Q8NG50 284 aa19.47■□□□□ 0.71
SPNS3-201ENST00000355530 DYDC1Q8WWB3 177 aa19.47■□□□□ 0.71
SPNS3-201ENST00000355530 POMGNT1Q8WZA1 660 aa19.47■□□□□ 0.71
SPNS3-201ENST00000355530 LPAR1Q92633 364 aa19.47■□□□□ 0.71
SPNS3-201ENST00000355530 ARHGEF2Q92974 986 aaKnown RBP19.47■□□□□ 0.71
SPNS3-201ENST00000355530 TACO1Q9BSH4 297 aaKnown RBP19.47■□□□□ 0.71
SPNS3-201ENST00000355530 C1orf112Q9NSG2 853 aa19.47■□□□□ 0.71
SPNS3-201ENST00000355530 ATF2P15336 505 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 GSCP56915 257 aaPredicted RBP19.46■□□□□ 0.71
SPNS3-201ENST00000355530 SLC39A4Q6P5W5 647 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 TRPM8Q7Z2W7 1104 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 MCOLN2Q8IZK6 566 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 CPXCR1Q8N123 301 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 GPD1LQ8N335 351 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 NTPCRQ9BSD7 190 aaKnown RBP19.46■□□□□ 0.71
SPNS3-201ENST00000355530 MTFR1LQ9H019 292 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 CHST7Q9NS84 486 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 MROH7Q68CQ1 1323 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 TTC4O95801 387 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 OAS1P00973 400 aaKnown RBP19.46■□□□□ 0.71
SPNS3-201ENST00000355530 SCP2P22307 547 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 IVDP26440 423 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 CENPCQ03188 943 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 PTP4A2Q12974 167 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 CHADLQ6NUI6 762 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 ANO5Q75V66 913 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 TAAR1Q96RJ0 339 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 TRAIPQ9BWF2 469 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 DCLK3Q9C098 648 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 SLC38A10Q9HBR0 1119 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 HOMER2Q9NSB8 354 aa19.46■□□□□ 0.71
SPNS3-201ENST00000355530 TMEM120BA0PK00 339 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 MGRN1O60291 552 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 SNX3O60493 162 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 SORBS3O60504 671 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 TCEA3O75764 348 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 CHKAP35790 457 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 RPS6P62753 249 aaKnown RBP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 PREPLQ4J6C6 727 aaPredicted RBP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 TRMT1LQ7Z2T5 733 aaKnown RBP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 ATG4AQ8WYN0 398 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 HNRNPDLO14979 420 aaKnown RBP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 ATP9AO75110 1047 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 MYCLP12524 364 aaPredicted RBP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 GARTP22102 1010 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 ITGA8P53708 1063 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 OTUD6AQ7L8S5 288 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 BSNDQ8WZ55 320 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 DDX27Q96GQ7 796 aaKnown RBP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 RAVER2Q9HCJ3 691 aaKnown RBP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 TPX2Q9ULW0 747 aaKnown RBP19.45■□□□□ 0.7
SPNS3-201ENST00000355530 PCDHB2Q9Y5E7 798 aa19.45■□□□□ 0.7
SPNS3-201ENST00000355530 THAP12O43422 761 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 RAD17O75943 681 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 RRM1P23921 792 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 MAP2K2P36507 400 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 BPIFB4P59827 614 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 MAP3K10Q02779 954 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 LLGL1Q15334 1064 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 BRDTQ58F21 947 aaPredicted RBP19.44■□□□□ 0.7
SPNS3-201ENST00000355530 RMDN3Q96TC7 470 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 MYCBPQ99417 103 aaPredicted RBP19.44■□□□□ 0.7
SPNS3-201ENST00000355530 PDCD2LQ9BRP1 358 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 GEMIN8Q9NWZ8 242 aaKnown RBP19.44■□□□□ 0.7
SPNS3-201ENST00000355530 MYPNQ86TC9 1320 aa19.44■□□□□ 0.7
SPNS3-201ENST00000355530 CFAP73A6NFT4 308 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 PSTPIP1O43586 416 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 NSFP46459 744 aaKnown RBP19.43■□□□□ 0.7
SPNS3-201ENST00000355530 ELF3P78545 371 aaPredicted RBP19.43■□□□□ 0.7
SPNS3-201ENST00000355530 VSTM1Q6UX27 236 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 C15orf39Q6ZRI6 1047 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 RPAINQ86UA6 219 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 BBOF1Q8ND07 529 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 ATL2Q8NHH9 583 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 PI4K2AQ9BTU6 479 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 MOV10L1Q9BXT6 1211 aaKnown RBP19.43■□□□□ 0.7
SPNS3-201ENST00000355530 TRIM7Q9C029 511 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 PXMP2Q9NR77 195 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 ANAPC5Q9UJX4 755 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 USP15Q9Y4E8 981 aaPredicted RBP19.43■□□□□ 0.7
SPNS3-201ENST00000355530 TESPA1A2RU30 521 aaPredicted RBP19.43■□□□□ 0.7
SPNS3-201ENST00000355530 SLC8A1P32418 973 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 MKRN4PQ13434 485 aaPredicted RBP19.43■□□□□ 0.7
SPNS3-201ENST00000355530 WLSQ5T9L3 541 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 PLCD3Q8N3E9 789 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 CCDC63Q8NA47 563 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 MTMR14Q8NCE2 650 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 SENP7Q9BQF6 1050 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 HERPUD2Q9BSE4 406 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 PCDHA10Q9Y5I2 948 aa19.43■□□□□ 0.7
SPNS3-201ENST00000355530 ADGRA3Q8IWK6 1321 aa19.42■□□□□ 0.7
SPNS3-201ENST00000355530 C21orf2O43822 256 aa19.42■□□□□ 0.7
SPNS3-201ENST00000355530 PROSCO94903 275 aa19.42■□□□□ 0.7
SPNS3-201ENST00000355530 ADCY8P40145 1251 aa19.42■□□□□ 0.7
SPNS3-201ENST00000355530 RTP1P59025 263 aa19.42■□□□□ 0.7
SPNS3-201ENST00000355530 KLF1Q13351 362 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms