RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ZNF618Q5T7W0 954 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 HGSNATQ68CP4 663 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 RAD9BQ6WBX8 426 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 TRAPPC11Q7Z392 1133 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 NT5DC4Q86YG4 428 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 CD302Q8IX05 232 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 FAM126BQ8IXS8 530 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 CCDC170Q8IYT3 715 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 USP38Q8NB14 1042 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 U2AF1L4Q8WU68 220 aaKnown RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 MTMR12Q9C0I1 747 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 GPR88Q9GZN0 384 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 AGO3Q9H9G7 860 aaKnown RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 ARHGAP20Q9P2F6 1191 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 C2CD2Q9Y426 696 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 CITO14578 2027 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 CD4P01730 458 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 TMEM191BP0C7N4 346 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 PIK3CAP42336 1068 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 MNX1P50219 401 aaPredicted RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 TFAMQ00059 246 aaKnown RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 GCNT1Q02742 428 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 NFX1Q12986 1120 aaKnown RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 NCOA4Q13772 614 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 LPIN1Q14693 890 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 MTF1Q14872 753 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 DRAP1Q14919 205 aaPredicted RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 IRF2BP2Q7Z5L9 587 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 FMNL3Q8IVF7 1028 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 ARHGEF19Q8IW93 802 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 CAGE1Q8TC20 777 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 HELQQ8TDG4 1101 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 ANKRD36BP1Q96IX9 119 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 FAM81BQ96LP2 452 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 NT5C1BQ96P26 610 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 NXF3Q9H4D5 531 aaKnown RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 NHEJ1Q9H9Q4 299 aaPredicted RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 ERVK-5Q9HDB9 667 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 UBE2TQ9NPD8 197 aaPredicted RBP10.37□□□□□ -0.75
NPHP1-202ENST00000355301 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 PADI3Q9ULW8 664 aa10.37□□□□□ -0.75
NPHP1-202ENST00000355301 MKI67P46013 3256 aaKnown RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 PHACTR2O75167 634 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 TNNC2P02585 160 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 SERPING1P05155 500 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 NFICP08651 508 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 HSPA1AP0DMV8 641 aaKnown RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 HSPA1BP0DMV9 641 aaKnown RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 SOX5P35711 763 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 PRKCIP41743 596 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 STAT1P42224 750 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 YARSP54577 528 aaKnown RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 PAK2Q13177 524 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 WDR44Q5JSH3 913 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 TWF2Q6IBS0 349 aaKnown RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 JADE1Q6IE81 842 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 ALKAL1Q6UXT8 129 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 TOGARAM2Q6ZUX3 1019 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 ENOSF1Q7L5Y1 443 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 CCAR2Q8N163 923 aaKnown RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 C17orf53Q8N3J3 647 aaPredicted RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 PPM1KQ8N3J5 372 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 SMG8Q8ND04 991 aaKnown RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 SNX27Q96L92 541 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 PI4K2AQ9BTU6 479 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 TRAIPQ9BWF2 469 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 OSBPL7Q9BZF2 842 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 C1orf112Q9NSG2 853 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 SPTLC3Q9NUV7 552 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 DERAQ9Y315 318 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 HES2Q9Y543 173 aa10.36□□□□□ -0.75
NPHP1-202ENST00000355301 BZW2Q9Y6E2 419 aaKnown RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 EPN1Q9Y6I3 576 aaPredicted RBP10.36□□□□□ -0.75
NPHP1-202ENST00000355301 SSU72P8A0A1W2PR75 194 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 RECQL4O94761 1208 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 NDUFA10O95299 355 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 ASS1P00966 412 aaKnown RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 CST3P01034 146 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 TFRCP02786 760 aaKnown RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 PLEKP08567 350 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 GHRP10912 638 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 FERP16591 822 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 CD52P31358 61 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 MFAP3P55082 362 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 MAPK8IP2Q13387 824 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 TMEM132DQ14C87 1099 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 ASIC2Q16515 512 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 ANKRD33Q7Z3H0 272 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 TATDN2Q93075 761 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 KREMEN1Q96MU8 473 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 TSPAN18Q96SJ8 248 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 IMPG2Q9BZV3 1241 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 CNTN3Q9P232 1028 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 IPPQ9Y573 584 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 FOXN3O00409 490 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 PITPNM1O00562 1244 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 CCP110O43303 1012 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 EVI5O60447 810 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms