RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 GANQ9H2C0 597 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 HESX1Q9UBX0 185 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 ZNF233A6NK53 670 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 BAG3O95817 575 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 PDHA1P08559 390 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 TCF7P36402 384 aaPredicted RBP11.54□□□□□ -0.56
SND1-201ENST00000354725 APBA1Q02410 837 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 KLC1Q07866 573 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 PDAP1Q13442 181 aaKnown RBP11.54□□□□□ -0.56
SND1-201ENST00000354725 ZNF362Q5T0B9 420 aaPredicted RBP11.54□□□□□ -0.56
SND1-201ENST00000354725 GLIS3Q8NEA6 775 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 WDR60Q8WVS4 1066 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 STON2Q8WXE9 905 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 HAS1Q92839 578 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
SND1-201ENST00000354725 TBC1D20Q96BZ9 403 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 DCPSQ96C86 337 aaKnown RBP11.54□□□□□ -0.56
SND1-201ENST00000354725 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 KCNMB3Q9NPA1 279 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.54□□□□□ -0.565e-7■■■■□ 22.3
SND1-201ENST00000354725 ZNF180Q9UJW8 692 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 ARPC4-TTLL3A0A0A6YYG9 625 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 TCP10L2B9ZVM9 353 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 GLI1P08151 1106 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 ATP2A2P16615 1042 aaKnown RBP11.54□□□□□ -0.56
SND1-201ENST00000354725 HOXD10P28358 340 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SLC1A4P43007 532 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 SULT2A1Q06520 285 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 BRSK2Q8IWQ3 736 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 TGFBRAP1Q8WUH2 860 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 CLMNQ96JQ2 1002 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 MBOAT7Q96N66 472 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 NELL2Q99435 816 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 DCAF16Q9NXF7 216 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 DLGAP2Q9P1A6 1054 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 CHMP2BQ9UQN3 213 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 LRRC42Q9Y546 428 aa11.54□□□□□ -0.56
SND1-201ENST00000354725 CFAP73A6NFT4 308 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 SERPING1P05155 500 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 NFKBIAP25963 317 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 CD97P48960 835 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 CDK8P49336 464 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 JAG1P78504 1218 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 GFPT1Q06210 699 aaPredicted RBP11.53□□□□□ -0.56
SND1-201ENST00000354725 EIF2B5Q13144 721 aaKnown RBP11.53□□□□□ -0.56
SND1-201ENST00000354725 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 LETM2Q2VYF4 491 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 CFAP157Q5JU67 520 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 KAZNQ674X7 775 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 KCTD16Q68DU8 428 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 CACNA2D3Q8IZS8 1091 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 SUN5Q8TC36 379 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 SEC14L1Q92503 715 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 HHIPL1Q96JK4 782 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 ZIM3Q96PE6 472 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 VCXQ9H320 206 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 FAM155AB1AL88 458 aaPredicted RBP11.53□□□□□ -0.56
SND1-201ENST00000354725 H0YGN5 161 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 NAPAP54920 295 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 PAK2Q13177 524 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 BYSLQ13895 437 aaKnown RBP11.53□□□□□ -0.56
SND1-201ENST00000354725 PRAMEF18Q5VWM3 479 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
SND1-201ENST00000354725 REXO1Q8N1G1 1221 aaKnown RBP11.53□□□□□ -0.56
SND1-201ENST00000354725 CRYGNQ8WXF5 182 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
SND1-201ENST00000354725 EHD2Q9NZN4 543 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 SUCLA2Q9P2R7 463 aaPredicted RBP11.53□□□□□ -0.56
SND1-201ENST00000354725 TRIM17Q9Y577 477 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 NFS1Q9Y697 457 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 TLL2Q9Y6L7 1015 aa11.53□□□□□ -0.56
SND1-201ENST00000354725 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.56
SND1-201ENST00000354725 PCK1P35558 622 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 GUCY2FP51841 1108 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 LRP8Q14114 963 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 SLC18A3Q16572 532 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 LRRC57Q8N9N7 239 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 LILRB1Q8NHL6 650 aaPredicted RBP11.52□□□□□ -0.56
SND1-201ENST00000354725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.52□□□□□ -0.561e-6■■■□□ 14.9
SND1-201ENST00000354725 AZIN2Q96A70 460 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 CALML4Q96GE6 196 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 CARD9Q9H257 536 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 PPANQ9NQ55 473 aaKnown RBP11.52□□□□□ -0.56
SND1-201ENST00000354725 FAM207AQ9NSI2 230 aaPredicted RBP11.52□□□□□ -0.56
SND1-201ENST00000354725 QPCTLQ9NXS2 382 aa11.52□□□□□ -0.56
SND1-201ENST00000354725 SGTAO43765 313 aa11.52□□□□□ -0.57
SND1-201ENST00000354725 HSPA9P38646 679 aaKnown RBP11.52□□□□□ -0.57
SND1-201ENST00000354725 C1QTNF8P60827 252 aa11.52□□□□□ -0.57
SND1-201ENST00000354725 NOL9Q5SY16 702 aaKnown RBP11.52□□□□□ -0.57
SND1-201ENST00000354725 DUS1LQ6P1R4 473 aaKnown RBP11.52□□□□□ -0.57
SND1-201ENST00000354725 SLC2A7Q6PXP3 512 aa11.52□□□□□ -0.57
SND1-201ENST00000354725 MAML3Q96JK9 1138 aa11.52□□□□□ -0.57
SND1-201ENST00000354725 NOX5Q96PH1 765 aa11.52□□□□□ -0.57
SND1-201ENST00000354725 EIF2AK1Q9BQI3 630 aaKnown RBP11.52□□□□□ -0.57
SND1-201ENST00000354725 MAK16Q9BXY0 300 aaKnown RBP11.52□□□□□ -0.57
SND1-201ENST00000354725 SLC4A7Q9Y6M7 1214 aa11.52□□□□□ -0.57
SND1-201ENST00000354725 GMNCA6NCL1 334 aa11.52□□□□□ -0.57
SND1-201ENST00000354725 TMEM110-MUSTN1A8MSY1 372 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms