RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TBC1D22BQ9NU19 505 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 CTNNAL1Q9UBT7 734 aa26.18■■□□□ 1.78
CPNE1-202ENST00000352393 ZNF70Q9UC06 446 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-202ENST00000352393 TCP11X1B4DZS4 312 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 C21orf2O43822 256 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 SORBS3O60504 671 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 PLA2G4FQ68DD2 849 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 SLC39A4Q6P5W5 647 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 KIFC3Q9BVG8 833 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 TRIM7Q9C029 511 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 ARID2Q68CP9 1835 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 UBOX5O94941 541 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 GAS8O95995 478 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 NPTX2P47972 431 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 GCNT1Q02742 428 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 CYP24A1Q07973 514 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 RIPK1Q13546 671 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 MCOLN2Q8IZK6 566 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 DDX27Q96GQ7 796 aaKnown RBP26.17■■□□□ 1.78
CPNE1-202ENST00000352393 WDR81Q562E7 1941 aa26.17■■□□□ 1.78
CPNE1-202ENST00000352393 ATF2P15336 505 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 SLC1A1P43005 524 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 PSMC5P62195 406 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 GALNTL6Q49A17 601 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 SV2AQ7L0J3 742 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 CKAP2Q8WWK9 683 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 ELMO3Q96BJ8 720 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 ANKEF1Q9NU02 776 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 NINJ2Q9NZG7 142 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 LGALS13Q9UHV8 139 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 NEU2Q9Y3R4 380 aa26.16■■□□□ 1.78
CPNE1-202ENST00000352393 CALCAP01258 141 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 NCALDP61601 193 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 XKR9Q5GH70 373 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 ENOSF1Q7L5Y1 443 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 CDAN1Q8IWY9 1227 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 FAM81BQ96LP2 452 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 TRAIPQ9BWF2 469 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 R3HDM2Q9Y2K5 976 aaKnown RBP26.15■■□□□ 1.78
CPNE1-202ENST00000352393 MYPNQ86TC9 1320 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 DENND3A2RUS2 1198 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 H0YIN7 160 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 KRT5P13647 590 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 EZRP15311 586 aaKnown RBP26.15■■□□□ 1.78
CPNE1-202ENST00000352393 SCP2P22307 547 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 CENPCQ03188 943 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 KYNUQ16719 465 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 MCF2L2Q86YR7 1114 aa26.15■■□□□ 1.78
CPNE1-202ENST00000352393 ADGRA3Q8IWK6 1321 aa26.14■■□□□ 1.78
CPNE1-202ENST00000352393 SUN1O94901 812 aa26.14■■□□□ 1.78
CPNE1-202ENST00000352393 MYBL1P10243 752 aa26.14■■□□□ 1.78
CPNE1-202ENST00000352393 JAK3P52333 1124 aa26.14■■□□□ 1.78
CPNE1-202ENST00000352393 PTP4A2Q12974 167 aa26.14■■□□□ 1.78
CPNE1-202ENST00000352393 DMP1Q13316 513 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-202ENST00000352393 TRIP13Q15645 432 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-202ENST00000352393 SYTL5Q8TDW5 730 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-202ENST00000352393 DNAJC17Q9NVM6 304 aaKnown RBP26.14■■□□□ 1.78
CPNE1-202ENST00000352393 THAP12O43422 761 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 TBC1D12O60347 775 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 CCNE2O96020 404 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 RRM1P23921 792 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 KLF1Q13351 362 aaPredicted RBP26.14■■□□□ 1.77
CPNE1-202ENST00000352393 MPP2Q14168 576 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 GIMAP7Q8NHV1 300 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 BSNDQ8WZ55 320 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 TRIM11Q96F44 468 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 ANAPC5Q9UJX4 755 aa26.14■■□□□ 1.77
CPNE1-202ENST00000352393 UMODL1Q5DID0 1318 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 O00370 1275 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 ZC3H11AO75152 810 aaKnown RBP eCLIP26.13■■□□□ 1.77
CPNE1-202ENST00000352393 GJB6O95452 261 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 ENPEPQ07075 957 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 E2F5Q15329 346 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 CRELD2Q6UXH1 353 aaPredicted RBP26.13■■□□□ 1.77
CPNE1-202ENST00000352393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.13■■□□□ 1.773e-8■□□□□ 9.3
CPNE1-202ENST00000352393 USP37Q86T82 979 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 TBC1D1Q86TI0 1168 aaPredicted RBP26.13■■□□□ 1.77
CPNE1-202ENST00000352393 ANKRD42Q8N9B4 389 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 ATL2Q8NHH9 583 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 TCP11Q8WWU5 503 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 ATP6V0A4Q9HBG4 840 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 BAIAP2L1Q9UHR4 511 aa26.13■■□□□ 1.77
CPNE1-202ENST00000352393 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.13■■□□□ 1.77
CPNE1-202ENST00000352393 LOC102724159A0A0B4J2E5 919 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 FOXO6A8MYZ6 492 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 WDR64B1ANS9 1081 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 PWP2Q15269 919 aaKnown RBP26.12■■□□□ 1.77
CPNE1-202ENST00000352393 SPDYE2Q495Y8 402 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 NUGGCQ68CJ6 796 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 SPIRE2Q8WWL2 714 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 PI4K2AQ9BTU6 479 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 KMT5AQ9NQR1 393 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 GH1P01241 217 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 CETPP11597 493 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 BRAFP15056 766 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 ELF1P32519 619 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 NF2P35240 595 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 SPATA21Q7Z572 469 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 ZNF677Q86XU0 584 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 GBP7Q8N8V2 638 aaPredicted RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms