RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ZMAT2Q96NC0 199 aaKnown RBP29.28■■■□□ 2.28
SSBP4-202ENST00000348495 TSPAN18Q96SJ8 248 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 KLK14Q9P0G3 267 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 GIT1Q9Y2X7 761 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 TRIP11Q15643 1979 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 EOMESO95936 686 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 ZBTB6Q15916 424 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 DUOXA2Q1HG44 320 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 TDRD10Q5VZ19 366 aaKnown RBP29.28■■■□□ 2.28
SSBP4-202ENST00000348495 CRACR2AQ9BSW2 395 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 PRKAG2Q9UGJ0 569 aa29.28■■■□□ 2.28
SSBP4-202ENST00000348495 ITIH6Q6UXX5 1313 aa29.27■■■□□ 2.28
SSBP4-202ENST00000348495 PDCD11Q14690 1871 aaKnown RBP29.27■■■□□ 2.28
SSBP4-202ENST00000348495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.27■■■□□ 2.28
SSBP4-202ENST00000348495 EPC2Q52LR7 807 aa29.27■■■□□ 2.28
SSBP4-202ENST00000348495 DPY19L2P1Q6NXN4 242 aa29.27■■■□□ 2.28
SSBP4-202ENST00000348495 GBP6Q6ZN66 633 aa29.27■■■□□ 2.28
SSBP4-202ENST00000348495 TNS4Q8IZW8 715 aa29.27■■■□□ 2.28
SSBP4-202ENST00000348495 GSTCDQ8NEC7 633 aa29.27■■■□□ 2.28
SSBP4-202ENST00000348495 LMO3Q8TAP4 145 aa29.27■■■□□ 2.28
SSBP4-202ENST00000348495 MTMR12Q9C0I1 747 aa29.27■■■□□ 2.28
SSBP4-202ENST00000348495 KLK7P49862 253 aa29.26■■■□□ 2.27
SSBP4-202ENST00000348495 TFAMQ00059 246 aaKnown RBP29.26■■■□□ 2.27
SSBP4-202ENST00000348495 TMEM132DQ14C87 1099 aa29.26■■■□□ 2.27
SSBP4-202ENST00000348495 EXOC3L4Q17RC7 722 aa29.26■■■□□ 2.27
SSBP4-202ENST00000348495 SPECC1LQ69YQ0 1117 aa29.26■■■□□ 2.27
SSBP4-202ENST00000348495 CRIPAKQ8N1N5 446 aa29.26■■■□□ 2.27
SSBP4-202ENST00000348495 ELAC1Q9H777 363 aaKnown RBP29.26■■■□□ 2.27
SSBP4-202ENST00000348495 UBN1Q9NPG3 1134 aa29.26■■■□□ 2.27
SSBP4-202ENST00000348495 PCDH10Q9P2E7 1040 aa29.26■■■□□ 2.27
SSBP4-202ENST00000348495 SMIM28A0A1B0GU29 152 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 PFKMP08237 780 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 PON1P27169 355 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 TAS1R2Q8TE23 839 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 KIF12Q96FN5 646 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 ZFP42Q96MM3 310 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 TMEM161AQ9NX61 479 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 GCNT4Q9P109 453 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 MICAL3Q7RTP6 2002 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 LTBP2Q14767 1821 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 PTGESO14684 152 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 INPPL1O15357 1258 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 MLH1P40692 756 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 CETN1Q12798 172 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 TRAPPC11Q7Z392 1133 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 RPUSD2Q8IZ73 545 aaKnown RBP29.25■■■□□ 2.27
SSBP4-202ENST00000348495 FBXL13Q8NEE6 735 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 GAD1Q99259 594 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 RSAD1Q9HA92 442 aa29.25■■■□□ 2.27
SSBP4-202ENST00000348495 VNN1O95497 513 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 TMEM191BP0C7N4 346 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 SLC9A1P19634 815 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 IKBKEQ14164 716 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 RNF169Q8NCN4 708 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 CXorf38Q8TB03 319 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 CACTINQ8WUQ7 758 aaKnown RBP29.24■■■□□ 2.27
SSBP4-202ENST00000348495 SEMA4DQ92854 862 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 ANKRD36BP1Q96IX9 119 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 IL23AQ9NPF7 189 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 TTC3P53804 2025 aa29.24■■■□□ 2.27
SSBP4-202ENST00000348495 ARL5CA6NH57 179 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 EVI5O60447 810 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 TNNC2P02585 160 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 GLRA4Q5JXX5 417 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 TMC6Q7Z403 805 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 EHBP1Q8NDI1 1231 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 BADQ92934 168 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 ABHD14A-ACY1A0A1B0GW23 586 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 AFF1P51825 1210 aaKnown RBP29.23■■■□□ 2.27
SSBP4-202ENST00000348495 BIRC3Q13489 604 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 SCARA3Q6AZY7 606 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 TRIM65Q6PJ69 517 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 C1orf127Q8N9H9 656 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 PPP1R10Q96QC0 940 aaKnown RBP29.23■■■□□ 2.27
SSBP4-202ENST00000348495 INTS2Q9H0H0 1204 aaKnown RBP29.23■■■□□ 2.27
SSBP4-202ENST00000348495 SIX2Q9NPC8 291 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 PLCB1Q9NQ66 1216 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 RNF19AQ9NV58 838 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 RAB20Q9NX57 234 aa29.23■■■□□ 2.27
SSBP4-202ENST00000348495 LRRN2O75325 713 aa29.22■■■□□ 2.27
SSBP4-202ENST00000348495 TBX2Q13207 712 aaPredicted RBP29.22■■■□□ 2.27
SSBP4-202ENST00000348495 SIX4Q9UIU6 781 aa29.22■■■□□ 2.27
SSBP4-202ENST00000348495 PLAGL2Q9UPG8 496 aa29.22■■■□□ 2.27
SSBP4-202ENST00000348495 OFD1O75665 1012 aa29.21■■■□□ 2.27
SSBP4-202ENST00000348495 HLA-DRAP01903 254 aa29.21■■■□□ 2.27
SSBP4-202ENST00000348495 PPIGQ13427 754 aaKnown RBP eCLIP29.21■■■□□ 2.271e-7■■■■□ 20.5
SSBP4-202ENST00000348495 C16orf59Q7L2K0 433 aa29.21■■■□□ 2.27
SSBP4-202ENST00000348495 DRC7Q8IY82 874 aa29.21■■■□□ 2.27
SSBP4-202ENST00000348495 C18orf25Q96B23 403 aaPredicted RBP29.21■■■□□ 2.27
SSBP4-202ENST00000348495 PPP1R9BQ96SB3 815 aa29.21■■■□□ 2.27
SSBP4-202ENST00000348495 LSM14BQ9BX40 385 aaKnown RBP29.21■■■□□ 2.27
SSBP4-202ENST00000348495 TTYH3Q9C0H2 523 aa29.21■■■□□ 2.27
SSBP4-202ENST00000348495 MIOSQ9NXC5 875 aa29.21■■■□□ 2.27
SSBP4-202ENST00000348495 UBQLN1Q9UMX0 589 aaKnown RBP29.21■■■□□ 2.27
SSBP4-202ENST00000348495 EPHB6O15197 1021 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 NOL4O94818 638 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 ACTN1P12814 892 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 IBSPP21815 317 aaPredicted RBP29.2■■■□□ 2.27
SSBP4-202ENST00000348495 APBA1Q02410 837 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 NAB2Q15742 525 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms