RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 NMT1P30419 496 aaKnown RBP15.79■□□□□ 0.12
HMGN3-202ENST00000344726 PLA2G5P39877 138 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 PKP1Q13835 747 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 NOLC1Q14978 699 aaKnown RBP eCLIP15.79■□□□□ 0.12
HMGN3-202ENST00000344726 USP41Q3LFD5 358 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 ATAT1Q5SQI0 421 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 ZPBP2Q6X784 338 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 APBB1IPQ7Z5R6 666 aaPredicted RBP15.79■□□□□ 0.12
HMGN3-202ENST00000344726 PALB2Q86YC2 1186 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 KRI1Q8N9T8 703 aaKnown RBP15.79■□□□□ 0.12
HMGN3-202ENST00000344726 SPRYD3Q8NCJ5 442 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 C3orf58Q8NDZ4 430 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 ZNF707Q96C28 371 aaPredicted RBP15.79■□□□□ 0.12
HMGN3-202ENST00000344726 ASIC4Q96FT7 647 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 STK17AQ9UEE5 414 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 DAXXQ9UER7 740 aaPredicted RBP15.79■□□□□ 0.12
HMGN3-202ENST00000344726 KCNG1Q9UIX4 513 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 SSX2IPQ9Y2D8 614 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 DOCK8Q8NF50 2099 aa15.79■□□□□ 0.12
HMGN3-202ENST00000344726 KMT2EQ8IZD2 1858 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 SF3B1O75533 1304 aaKnown RBP eCLIP15.78■□□□□ 0.125e-6■■■■■ 70.8
HMGN3-202ENST00000344726 K7ENM7 598 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 ADAM12O43184 909 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 TRAK2O60296 914 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
HMGN3-202ENST00000344726 GLUD1P00367 558 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 ASGR2P07307 311 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 CLCNKBP51801 687 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 YARSP54577 528 aaKnown RBP15.78■□□□□ 0.12
HMGN3-202ENST00000344726 MCL1Q07820 350 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 SLC10A6Q3KNW5 377 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 RRAGBQ5VZM2 374 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 LILRA6Q6PI73 481 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 DYMQ7RTS9 669 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 TMEM130Q8N3G9 435 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
HMGN3-202ENST00000344726 ACAP3Q96P50 834 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 PANK2Q9BZ23 570 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 ZHX3Q9H4I2 956 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 CNTN3Q9P232 1028 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 FNIP2Q9P278 1114 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 TBX20Q9UMR3 447 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 NR2E1Q9Y466 385 aa15.78■□□□□ 0.12
HMGN3-202ENST00000344726 FARP1Q9Y4F1 1045 aaPredicted RBP15.78■□□□□ 0.12
HMGN3-202ENST00000344726 MYMKA6NI61 221 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 H0YCG3 227 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 SPTLC2O15270 562 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 TBCAO75347 108 aaKnown RBP15.77■□□□□ 0.12
HMGN3-202ENST00000344726 PAPLNO95428 1278 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 F13A1P00488 732 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 PIGRP01833 764 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.12
HMGN3-202ENST00000344726 ZSCAN22P10073 491 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-202ENST00000344726 KCNE1P15382 129 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 SIGLEC14Q08ET2 396 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 STK38Q15208 465 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 UPP1Q16831 310 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 FOXD4L6Q3SYB3 417 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-202ENST00000344726 FAM171A1Q5VUB5 890 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 SLC39A4Q6P5W5 647 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 FOXD4L3Q6VB84 417 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-202ENST00000344726 C15orf39Q6ZRI6 1047 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 GPR65Q8IYL9 337 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 KREMEN2Q8NCW0 462 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 CMASQ8NFW8 434 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-202ENST00000344726 DDX12PQ92771 950 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 DNAJC19Q96DA6 116 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 CLSTN3Q9BQT9 956 aa15.77■□□□□ 0.12
HMGN3-202ENST00000344726 TOPORSQ9NS56 1045 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-202ENST00000344726 ARIH1Q9Y4X5 557 aaPredicted RBP15.77■□□□□ 0.12
HMGN3-202ENST00000344726 CCDC195A0A1B0GUA6 201 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 TMEM189-UBE2V1I3L0A0 370 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 I3L4J1 428 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 CLDN3O15551 220 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 FAM189A1O60320 539 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 PDGFBP01127 241 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-202ENST00000344726 TXLNAP40222 546 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 TNFSF9P41273 254 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 GTF2BQ00403 316 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 ZC2HC1CQ53FD0 456 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-202ENST00000344726 ZBTB41Q5SVQ8 909 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 BMP8AQ7Z5Y6 402 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 SFR1Q86XK3 245 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 ZDHHC14Q8IZN3 488 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 TDRD5Q8NAT2 981 aaKnown RBP15.76■□□□□ 0.11
HMGN3-202ENST00000344726 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 C18orf25Q96B23 403 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-202ENST00000344726 BICD1Q96G01 975 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 ZNF396Q96N95 335 aaPredicted RBP15.76■□□□□ 0.11
HMGN3-202ENST00000344726 TTPALQ9BTX7 342 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 IKZF4Q9H2S9 585 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.76■□□□□ 0.11
HMGN3-202ENST00000344726 LIMD1Q9UGP4 676 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 USTQ9Y2C2 406 aa15.76■□□□□ 0.11
HMGN3-202ENST00000344726 TISP43B9A030 160 aa15.75■□□□□ 0.11
HMGN3-202ENST00000344726 HNRNPDLO14979 420 aaKnown RBP15.75■□□□□ 0.11
HMGN3-202ENST00000344726 PPP6R2O75170 966 aa15.75■□□□□ 0.11
HMGN3-202ENST00000344726 B3GAT3O94766 335 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms