RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 E7EVH7 732 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 OATP04181 439 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 HSPA6P17066 643 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 SCP2P22307 547 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 APOBEC3FQ8IUX4 373 aaKnown RBP15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 PSPC1Q8WXF1 523 aaKnown RBP15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 EPN3Q9H201 632 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 FAM169AQ9Y6X4 670 aa15.93■□□□□ 0.14
VIPAS39-202ENST00000343765 WDR81Q562E7 1941 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 K7ERI5 159 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 COILP38432 576 aaPredicted RBP15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 CORO7P57737 925 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 RTP1P59025 263 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 CCDC25Q86WR0 208 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 C1orf131Q8NDD1 294 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 ATG4AQ8WYN0 398 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 CYFIP2Q96F07 1278 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 TXLNGYQ9BZA5 131 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 HOXC10Q9NYD6 342 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 FBXO40Q9UH90 709 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 A6NNZ2 444 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 EDN1P05305 212 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 FGFR4P22455 802 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 GJC1P36383 396 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 PSMD6Q15008 389 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 TUBB8Q3ZCM7 444 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 ZACNQ401N2 412 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 TREML2Q5T2D2 321 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 DENND2CQ68D51 928 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 SCARA3Q6AZY7 606 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 C15orf39Q6ZRI6 1047 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 MCOLN2Q8IZK6 566 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 MORC4Q8TE76 937 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 SLC7A3Q8WY07 619 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 MSTO1Q9BUK6 570 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 EPB41L4BQ9H329 900 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 PCYOX1Q9UHG3 505 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 ZNFX1Q9P2E3 1918 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 ARID2Q68CP9 1835 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 UMODL1Q5DID0 1318 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 MROH7Q68CQ1 1323 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 CAND2O75155 1236 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 VNN1O95497 513 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 NSFP46459 744 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 PPP1R7Q15435 360 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 SIX1Q15475 284 aaPredicted RBP15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 TMEM270Q6UE05 265 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 ARFGAP2Q8N6H7 521 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 C11orf70Q9BRQ4 267 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 APOBEC3GQ9HC16 384 aaKnown RBP15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 PCDHB4Q9Y5E5 795 aa15.92■□□□□ 0.14
VIPAS39-202ENST00000343765 MYPNQ86TC9 1320 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 GGPS1O95749 300 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 C4BPAP04003 597 aaKnown RBP15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 UNGP13051 313 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 MCCD1P59942 119 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 CRELD2Q6UXH1 353 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 ENOSF1Q7L5Y1 443 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 RNF25Q96BH1 459 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 PORCNQ9H237 461 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 SEMA4AQ9H3S1 761 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 AFG3L2Q9Y4W6 797 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 PCDHB2Q9Y5E7 798 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 H0YCG3 227 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 NF2P35240 595 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 PPP2R2AP63151 447 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 DRP2Q13474 957 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 SLC29A2Q14542 456 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 SGO2Q562F6 1265 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 NLRP14Q86W24 1093 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 ZNF473Q8WTR7 871 aaKnown RBP15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 FAM118BQ9BPY3 351 aa15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 MAFBQ9Y5Q3 323 aaPredicted RBP15.91■□□□□ 0.14
VIPAS39-202ENST00000343765 PODXLO00592 558 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 ATP2A1O14983 1001 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 STAM2O75886 525 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 GJB6O95452 261 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 UBA1P22314 1058 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 MARK3P27448 753 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 SSR1P43307 286 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 TRIP13Q15645 432 aaPredicted RBP15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 AGBL2Q5U5Z8 902 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 EMC10Q5UCC4 262 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 OR5B17Q8NGF7 314 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 MYCBPAPQ8TBZ2 947 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 CCT8L2Q96SF2 557 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 PABPC3Q9H361 631 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 DHX33Q9H6R0 707 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 KIAA1586Q9HCI6 787 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 MTRF1LQ9UGC7 380 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 SLC12A6Q9UHW9 1150 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 MYH9P35579 1960 aaKnown RBP15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 TTLL13PA6NNM8 815 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 O00370 1275 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 ZC3H11AO75152 810 aaKnown RBP eCLIP15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 SLCO1A2P46721 670 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 ZBTB33Q86T24 672 aa15.9■□□□□ 0.14
VIPAS39-202ENST00000343765 CCDC50Q8IVM0 306 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms