RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CCDC39Q9UFE4 941 aa22.05■■□□□ 1.12
SYNE2-201ENST00000341472 FBXO2Q9UK22 296 aaPredicted RBP22.05■■□□□ 1.12
SYNE2-201ENST00000341472 IGFBP6P24592 240 aaPredicted RBP22.04■■□□□ 1.12
SYNE2-201ENST00000341472 ZNF131P52739 623 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 MCL1Q07820 350 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 NOLC1Q14978 699 aaKnown RBP eCLIP22.04■■□□□ 1.12
SYNE2-201ENST00000341472 PSMD5Q16401 504 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.04■■□□□ 1.12
SYNE2-201ENST00000341472 BMP8AQ7Z5Y6 402 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 KCNN1Q92952 543 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 SNX21Q969T3 373 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 PBXIP1Q96AQ6 731 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 SNX27Q96L92 541 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 ZMAT2Q96NC0 199 aaKnown RBP22.04■■□□□ 1.12
SYNE2-201ENST00000341472 CLSTN3Q9BQT9 956 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 RHOBTB2Q9BYZ6 727 aa22.04■■□□□ 1.12
SYNE2-201ENST00000341472 STX6O43752 255 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 TRAK2O60296 914 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 TBCAO75347 108 aaKnown RBP22.03■■□□□ 1.12
SYNE2-201ENST00000341472 RFPL2O75678 378 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 FGFR3P22607 806 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 RPL9P32969 192 aaKnown RBP22.03■■□□□ 1.12
SYNE2-201ENST00000341472 SIGLEC14Q08ET2 396 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 SLC10A6Q3KNW5 377 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 CD300LGQ6UXG3 332 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 SMG7Q92540 1137 aaKnown RBP22.03■■□□□ 1.12
SYNE2-201ENST00000341472 LARP4BQ92615 738 aaKnown RBP22.03■■□□□ 1.12
SYNE2-201ENST00000341472 CLIC6Q96NY7 704 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 PIDD1Q9HB75 910 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 GOLGA2P5Q9HBQ8 144 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 CNTN3Q9P232 1028 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 TBX20Q9UMR3 447 aa22.03■■□□□ 1.12
SYNE2-201ENST00000341472 CLTAP09496 248 aa22.02■■□□□ 1.12
SYNE2-201ENST00000341472 TXLNAP40222 546 aa22.02■■□□□ 1.12
SYNE2-201ENST00000341472 LIG4P49917 911 aa22.02■■□□□ 1.12
SYNE2-201ENST00000341472 SOX4Q06945 474 aaPredicted RBP22.02■■□□□ 1.12
SYNE2-201ENST00000341472 SLC39A14Q15043 492 aa22.02■■□□□ 1.12
SYNE2-201ENST00000341472 SEZ6Q53EL9 994 aa22.02■■□□□ 1.12
SYNE2-201ENST00000341472 RRAGBQ5VZM2 374 aa22.02■■□□□ 1.12
SYNE2-201ENST00000341472 KRI1Q8N9T8 703 aaKnown RBP22.02■■□□□ 1.12
SYNE2-201ENST00000341472 PLEKHA5Q9HAU0 1116 aa22.02■■□□□ 1.12
SYNE2-201ENST00000341472 WDR6Q9NNW5 1121 aaKnown RBP22.02■■□□□ 1.12
SYNE2-201ENST00000341472 ZDHHC7Q9NXF8 308 aa22.02■■□□□ 1.12
SYNE2-201ENST00000341472 K7ENM7 598 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 PODXLO00592 558 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 UBALD2Q8IYN6 164 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 STAMQ92783 540 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 C18orf25Q96B23 403 aaPredicted RBP22.01■■□□□ 1.11
SYNE2-201ENST00000341472 ZNF707Q96C28 371 aaPredicted RBP22.01■■□□□ 1.11
SYNE2-201ENST00000341472 FAM122AQ96E09 287 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 USP28Q96RU2 1077 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 PRKD2Q9BZL6 878 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 STK17AQ9UEE5 414 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 SORCS3Q9UPU3 1222 aa22.01■■□□□ 1.11
SYNE2-201ENST00000341472 I3L4J1 428 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 MEFVO15553 781 aaPredicted RBP22■■□□□ 1.11
SYNE2-201ENST00000341472 ADAM12O43184 909 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 ZMYND10O75800 440 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 ASGR2P07307 311 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 ABCD1P33897 745 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 OR1D2P34982 312 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 BRCC3P46736 316 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 RAB33AQ14088 237 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 KYAT1Q16773 422 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 C3orf58Q8NDZ4 430 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 HAPLN2Q9GZV7 340 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 BACE2Q9Y5Z0 518 aa22■■□□□ 1.11
SYNE2-201ENST00000341472 MORC2Q9Y6X9 1032 aaPredicted RBP22■■□□□ 1.11
SYNE2-201ENST00000341472 HNRNPDLO14979 420 aaKnown RBP21.99■■□□□ 1.11
SYNE2-201ENST00000341472 PAPLNO95428 1278 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 PIGRP01833 764 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 MTMR3Q13615 1198 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 LIN9Q5TKA1 542 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 ANKS3Q6ZW76 656 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 SV2BQ7L1I2 683 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 PANK2Q9BZ23 570 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 MTRRQ9UBK8 725 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 NUB1Q9Y5A7 615 aa21.99■■□□□ 1.11
SYNE2-201ENST00000341472 TKTP29401 623 aaKnown RBP21.98■■□□□ 1.11
SYNE2-201ENST00000341472 NMT1P30419 496 aaKnown RBP21.98■■□□□ 1.11
SYNE2-201ENST00000341472 GTF2BQ00403 316 aa21.98■■□□□ 1.11
SYNE2-201ENST00000341472 CCDC73Q6ZRK6 1079 aa21.98■■□□□ 1.11
SYNE2-201ENST00000341472 DYMQ7RTS9 669 aa21.98■■□□□ 1.11
SYNE2-201ENST00000341472 HSCBQ8IWL3 235 aa21.98■■□□□ 1.11
SYNE2-201ENST00000341472 FBXW11Q9UKB1 542 aa21.98■■□□□ 1.11
SYNE2-201ENST00000341472 A0A0B4J269 797 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 OGTO15294 1046 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 HNRNPA1P09651 372 aaKnown RBP eCLIP21.97■■□□□ 1.11
SYNE2-201ENST00000341472 CXCL8P10145 99 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 GBP2P32456 591 aaPredicted RBP21.97■■□□□ 1.11
SYNE2-201ENST00000341472 PLA2G5P39877 138 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 STK38Q15208 465 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 PPM1LQ5SGD2 360 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 SUGP1Q8IWZ8 645 aaKnown RBP21.97■■□□□ 1.11
SYNE2-201ENST00000341472 FBXL6Q8N531 539 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 ASIC4Q96FT7 647 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 ZNF396Q96N95 335 aaPredicted RBP21.97■■□□□ 1.11
SYNE2-201ENST00000341472 FIZ1Q96SL8 496 aa21.97■■□□□ 1.11
SYNE2-201ENST00000341472 RPF1Q9H9Y2 349 aaKnown RBP21.97■■□□□ 1.11
SYNE2-201ENST00000341472 TFIP11Q9UBB9 837 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms