RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MRPL17Q9NRX2 175 aaKnown RBP13.64□□□□□ -0.23
LIN54-201ENST00000340417 RNF186Q9NXI6 227 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 TRPM5Q9NZQ8 1165 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 KLHL8Q9P2G9 620 aaPredicted RBP13.64□□□□□ -0.23
LIN54-201ENST00000340417 ANKRD26Q9UPS8 1709 aa13.64□□□□□ -0.23
LIN54-201ENST00000340417 HLA-DRAP01903 254 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 ZNF235Q14590 738 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 PLEKHA4Q9H4M7 779 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 HAUS4Q9H6D7 363 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 PCSK1NQ9UHG2 260 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 TOM1L1O75674 476 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 LBX2Q6XYB7 198 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 MSL3Q8N5Y2 521 aaKnown RBP13.63□□□□□ -0.23
LIN54-201ENST00000340417 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 ATP11AP98196 1134 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 FBXO32Q969P5 355 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 FSD1LQ9BXM9 530 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 DUSP11O75319 330 aaKnown RBP13.63□□□□□ -0.23
LIN54-201ENST00000340417 ASGR1P07306 291 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 YWHAHQ04917 246 aaPredicted RBP13.63□□□□□ -0.23
LIN54-201ENST00000340417 CCDC15Q0P6D6 951 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 SFSWAPQ12872 951 aaKnown RBP13.63□□□□□ -0.23
LIN54-201ENST00000340417 CAPN12Q6ZSI9 719 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 CYP2W1Q8TAV3 490 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 GOLPH3LQ9H4A5 285 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 DHX35Q9H5Z1 703 aaKnown RBP13.63□□□□□ -0.23
LIN54-201ENST00000340417 HDAC6Q9UBN7 1215 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 ANGPTL3Q9Y5C1 460 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 TACC3Q9Y6A5 838 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 H3BRJ5 948 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 GARSP41250 739 aaKnown RBP13.63□□□□□ -0.23
LIN54-201ENST00000340417 SNX1Q13596 522 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 ALKBH5Q6P6C2 394 aaKnown RBP13.63□□□□□ -0.23
LIN54-201ENST00000340417 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 CSGALNACT1Q8TDX6 532 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 EPAS1Q99814 870 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 SAR1BQ9Y6B6 198 aa13.63□□□□□ -0.23
LIN54-201ENST00000340417 WEE2P0C1S8 567 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 KRT15P19012 456 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 HTRA3P83110 453 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 DUSP28Q4G0W2 176 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 VEGFBP49765 207 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 DENND2CQ68D51 928 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 PDXDC1Q6P996 788 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 BBOF1Q8ND07 529 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 PDGFCQ9NRA1 345 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 DFFAO00273 331 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 SOX5P35711 763 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 ACADSBP45954 432 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 YWHAGP61981 247 aaKnown RBP eCLIP13.62□□□□□ -0.23
LIN54-201ENST00000340417 FMR1Q06787 632 aaKnown RBP eCLIP13.62□□□□□ -0.23
LIN54-201ENST00000340417 GOLGA7BQ2TAP0 167 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 PPP4R1Q8TF05 950 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 P3H4Q92791 437 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 NOP14P78316 857 aaKnown RBP13.62□□□□□ -0.23
LIN54-201ENST00000340417 RHOT2Q8IXI1 618 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 MAML3Q96JK9 1138 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 TRIM56Q9BRZ2 755 aaKnown RBP13.62□□□□□ -0.23
LIN54-201ENST00000340417 BASP1P80723 227 aaKnown RBP13.62□□□□□ -0.23
LIN54-201ENST00000340417 MDM2Q00987 491 aaPredicted RBP13.62□□□□□ -0.23
LIN54-201ENST00000340417 BHMTQ93088 406 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 CELF4Q9BZC1 486 aaKnown RBP13.62□□□□□ -0.23
LIN54-201ENST00000340417 NIF3L1Q9GZT8 377 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 ADAMTS1Q9UHI8 967 aa13.62□□□□□ -0.23
LIN54-201ENST00000340417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
LIN54-201ENST00000340417 SELPP16109 830 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 HSD17B4P51659 736 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 PTPAQ15257 358 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 ANO4Q32M45 955 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 LRP10Q7Z4F1 713 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 SLC7A5P2Q9GIP4 190 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 DHX38Q92620 1227 aaKnown RBP13.61□□□□□ -0.23
LIN54-201ENST00000340417 NHEJ1Q9H9Q4 299 aaPredicted RBP13.61□□□□□ -0.23
LIN54-201ENST00000340417 DBR1Q9UK59 544 aaKnown RBP13.61□□□□□ -0.23
LIN54-201ENST00000340417 HEY1Q9Y5J3 304 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 MOXD2PA6NHM9 499 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 AP1G2O75843 785 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 CPP00450 1065 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 TFDP2Q14188 446 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 IL31Q6EBC2 164 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 RBBP8NLQ8NC74 664 aaPredicted RBP13.61□□□□□ -0.23
LIN54-201ENST00000340417 FAM86B1E9PN63 330 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 FAM86B2P0C5J1 330 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 CKBP12277 381 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 FDPSP14324 419 aaKnown RBP13.61□□□□□ -0.23
LIN54-201ENST00000340417 LHX1P48742 406 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 C18orf8Q96DM3 657 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 RUNDC3BQ96NL0 473 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 ZKSCAN5Q9Y2L8 839 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 PASKQ96RG2 1323 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 POLR3GO15318 223 aaPredicted RBP13.61□□□□□ -0.23
LIN54-201ENST00000340417 NFE2Q16621 373 aaPredicted RBP13.61□□□□□ -0.23
LIN54-201ENST00000340417 MAGOHBQ96A72 148 aaKnown RBP13.61□□□□□ -0.23
LIN54-201ENST00000340417 TMEM8AQ9HCN3 771 aa13.61□□□□□ -0.23
LIN54-201ENST00000340417 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 CYP26A1O43174 497 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 GMNNO75496 209 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms