RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 GOLGA2P5Q9HBQ8 144 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 TOPORSQ9NS56 1045 aaPredicted RBP16.68■□□□□ 0.26
PRKN-201ENST00000338468 CNTN3Q9P232 1028 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 SEL1LQ9UBV2 794 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 A0A0B4J269 797 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 C2CD2LO14523 706 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 HNRNPDLO14979 420 aaKnown RBP16.67■□□□□ 0.26
PRKN-201ENST00000338468 EPCAMP16422 314 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 GAP43P17677 238 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 TNFSF9P41273 254 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 CASP5P51878 434 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 YARSP54577 528 aaKnown RBP16.67■□□□□ 0.26
PRKN-201ENST00000338468 KCNA1Q09470 495 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 BMS1Q14692 1282 aaKnown RBP16.67■□□□□ 0.26
PRKN-201ENST00000338468 EDAQ92838 391 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 CUEDC2Q9H467 287 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 RXFP1Q9HBX9 757 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 MRPL17Q9NRX2 175 aaKnown RBP16.67■□□□□ 0.26
PRKN-201ENST00000338468 TBC1D7Q9P0N9 293 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 CITO14578 2027 aa16.67■□□□□ 0.26
PRKN-201ENST00000338468 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
PRKN-201ENST00000338468 TADA2AO75478 443 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 URODP06132 367 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 CXCL8P10145 99 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 IDEP14735 1019 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 GLUD2P49448 558 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 CLCNKBP51801 687 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 PTPN5P54829 565 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 BECN1Q14457 450 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 PDCD11Q14690 1871 aaKnown RBP16.66■□□□□ 0.26
PRKN-201ENST00000338468 UPP1Q16831 310 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 RTP2Q5QGT7 225 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 TMEM130Q8N3G9 435 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 IQUBQ8NA54 791 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 C3orf58Q8NDZ4 430 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 FEZF2Q8TBJ5 459 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 SUSD6Q92537 303 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 C18orf25Q96B23 403 aaPredicted RBP16.66■□□□□ 0.26
PRKN-201ENST00000338468 PRRX2Q99811 253 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 TRIM9Q9C026 710 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 PANK4Q9NVE7 773 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 USP15Q9Y4E8 981 aaPredicted RBP16.66■□□□□ 0.26
PRKN-201ENST00000338468 STYXL1Q9Y6J8 313 aa16.66■□□□□ 0.26
PRKN-201ENST00000338468 TECTAO75443 2155 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 TTC26A0AVF1 554 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 TMEM189-UBE2V1I3L0A0 370 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 OGTO15294 1046 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 TEX28O15482 410 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 ADRB2P07550 413 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 CLTAP09496 248 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 MYBP10242 640 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 ADSSP30520 456 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 ABCD1P33897 745 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 MATR3P43243 847 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■■□ 23.9
PRKN-201ENST00000338468 CLCN4P51793 760 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 ENOX2Q16206 610 aaKnown RBP16.65■□□□□ 0.26
PRKN-201ENST00000338468 USP41Q3LFD5 358 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 SUGP1Q8IWZ8 645 aaKnown RBP16.65■□□□□ 0.26
PRKN-201ENST00000338468 CASP10Q92851 521 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 HVCN1Q96D96 273 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 UROC1Q96N76 676 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 MRPL44Q9H9J2 332 aaKnown RBP16.65■□□□□ 0.26
PRKN-201ENST00000338468 CDH22Q9UJ99 828 aa16.65■□□□□ 0.26
PRKN-201ENST00000338468 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.26
PRKN-201ENST00000338468 VWA8A3KMH1 1905 aa16.64■□□□□ 0.26
PRKN-201ENST00000338468 TMEM221A6NGB7 291 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 M0R296 226 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 HOXB8P17481 243 aaPredicted RBP16.64■□□□□ 0.25
PRKN-201ENST00000338468 CASP1P29466 404 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 KRT85P78386 507 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 SPAG1Q07617 926 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 ZBTB6Q15916 424 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.25
PRKN-201ENST00000338468 KANK3Q6NY19 840 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 DCLRE1AQ6PJP8 1040 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 TRIM67Q6ZTA4 783 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 BMP8AQ7Z5Y6 402 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 GPR65Q8IYL9 337 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 GLIS3Q8NEA6 775 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 PRSS33Q8NF86 280 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
PRKN-201ENST00000338468 HPS3Q969F9 1004 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 PBXIP1Q96AQ6 731 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 SPATA32Q96LK8 384 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 C7orf25Q9BPX7 421 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 APOL5Q9BWW9 433 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 EMILIN2Q9BXX0 1053 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 PLEKHA5Q9HAU0 1116 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 FAM13BQ9NYF5 915 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 CPSF3Q9UKF6 684 aaKnown RBP16.64■□□□□ 0.25
PRKN-201ENST00000338468 KCNH3Q9ULD8 1083 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 PLXNA3P51805 1871 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 TCHHQ07283 1943 aa16.64■□□□□ 0.25
PRKN-201ENST00000338468 LACTBL1A8MY62 500 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
PRKN-201ENST00000338468 B3GAT3O94766 335 aa16.63■□□□□ 0.25
PRKN-201ENST00000338468 GCNT3O95395 438 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms