RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 ECEL1O95672 775 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 HLA-DRAP01903 254 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 SIX1Q15475 284 aaPredicted RBP18.94■□□□□ 0.62
LRCH3-201ENST00000334859 C2CD6Q53TS8 623 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 PSPC1Q8WXF1 523 aaKnown RBP18.94■□□□□ 0.62
LRCH3-201ENST00000334859 RUNDC3BQ96NL0 473 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 KIAA1586Q9HCI6 787 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 ANKFY1Q9P2R3 1169 aa18.94■□□□□ 0.62
LRCH3-201ENST00000334859 AGO2Q9UKV8 859 aaKnown RBP18.94■□□□□ 0.62
LRCH3-201ENST00000334859 TLDC2A0PJX2 215 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SPATA31C2B4DYI2 1134 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 FGFR4P22455 802 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 RRM1P23921 792 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 NSFP46459 744 aaKnown RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 FNTAP49354 379 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 PSMD6Q15008 389 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SGO2Q562F6 1265 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 ANGEL2Q5VTE6 544 aaKnown RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 TDRD10Q5VZ19 366 aaKnown RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SPOPLQ6IQ16 392 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 C15orf39Q6ZRI6 1047 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 MCOLN2Q8IZK6 566 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 MICALL1Q8N3F8 863 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 C1orf54Q8WWF1 131 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 RNF25Q96BH1 459 aaPredicted RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 FAM81BQ96LP2 452 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 C12orf42Q96LP6 360 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 ZNF112Q9UJU3 913 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 ADAMTS5Q9UNA0 930 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 PCDHB2Q9Y5E7 798 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SRRM3A6NNA2 597 aaPredicted RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 STAM2O75886 525 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 UNGP13051 313 aaPredicted RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SCP2P22307 547 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 ABCD1P33897 745 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 WNT7BP56706 349 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SP2Q02086 613 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SLC29A2Q14542 456 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 ZACNQ401N2 412 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 LLGL2Q6P1M3 1020 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 POTEAQ6S8J7 498 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 MICALCLQ6ZW33 695 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 CCDC25Q86WR0 208 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SPATS2Q86XZ4 545 aaKnown RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 UHMK1Q8TAS1 419 aaKnown RBP18.93■□□□□ 0.62
LRCH3-201ENST00000334859 DEPTORQ8TB45 409 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 CEP89Q96ST8 783 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 SEMA4AQ9H3S1 761 aa18.93■□□□□ 0.62
LRCH3-201ENST00000334859 PTPRJQ12913 1337 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 CDR1P51861 262 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 ENPEPQ07075 957 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 SLC20A2Q08357 652 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 CALCOCO2Q13137 446 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 SNX1Q13596 522 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 TTC31Q49AM3 519 aaPredicted RBP18.92■□□□□ 0.62
LRCH3-201ENST00000334859 ASAP3Q8TDY4 903 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 ZNF302Q9NR11 478 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 RBAKQ9NYW8 714 aaPredicted RBP18.92■□□□□ 0.62
LRCH3-201ENST00000334859 MROH7Q68CQ1 1323 aa18.92■□□□□ 0.62
LRCH3-201ENST00000334859 GMNCA6NCL1 334 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 C19orf81C9J6K1 198 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 OATP04181 439 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 UBAP2Q5T6F2 1119 aaKnown RBP18.91■□□□□ 0.62
LRCH3-201ENST00000334859 CATSPERGQ6ZRH7 1159 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 PASD1Q8IV76 773 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 C12orf50Q8NA57 414 aaPredicted RBP18.91■□□□□ 0.62
LRCH3-201ENST00000334859 TLCD1Q96CP7 247 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 CYFIP2Q96F07 1278 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 TRIM11Q96F44 468 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 AVENQ9NQS1 362 aaPredicted RBP18.91■□□□□ 0.62
LRCH3-201ENST00000334859 MYPNQ86TC9 1320 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 TRAPPC3O43617 180 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 BPIFB4P59827 614 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 KRT17Q04695 432 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 ZNF677Q86XU0 584 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 SLC7A3Q8WY07 619 aa18.91■□□□□ 0.62
LRCH3-201ENST00000334859 ZBTB45Q96K62 511 aaPredicted RBP18.91■□□□□ 0.62
LRCH3-201ENST00000334859 SPDYE16A6NNV3 312 aaPredicted RBP18.9■□□□□ 0.62
LRCH3-201ENST00000334859 K7ERI5 159 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 ATP2A1O14983 1001 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 MYBL1P10243 752 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 HARSP12081 509 aaKnown RBP18.9■□□□□ 0.62
LRCH3-201ENST00000334859 CLDN10P78369 228 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 BYSLQ13895 437 aaKnown RBP18.9■□□□□ 0.62
LRCH3-201ENST00000334859 STXBP2Q15833 593 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 ZBTB41Q5SVQ8 909 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 SEPT14Q6ZU15 432 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 OTUD6BQ8N6M0 293 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 ATG4AQ8WYN0 398 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 MSTO1Q9BUK6 570 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 AZI2Q9H6S1 392 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 LRRC19Q9H756 370 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 CNOT10Q9H9A5 744 aaKnown RBP18.9■□□□□ 0.62
LRCH3-201ENST00000334859 ASIC3Q9UHC3 531 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 ATXN2Q99700 1313 aaKnown RBP18.9■□□□□ 0.62
LRCH3-201ENST00000334859 RGS16O15492 202 aaPredicted RBP18.9■□□□□ 0.62
LRCH3-201ENST00000334859 MEFVO15553 781 aaPredicted RBP18.9■□□□□ 0.62
LRCH3-201ENST00000334859 ATP4AP20648 1035 aa18.9■□□□□ 0.62
LRCH3-201ENST00000334859 GLRA2P23416 452 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms