RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 HOXA2O43364 376 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 DGKIO75912 1065 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 PPP3CAQ08209 521 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 TMEM132DQ14C87 1099 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 SURF1Q15526 300 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 NAB2Q15742 525 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 MIIPQ5JXC2 388 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 FAM117BQ6P1L5 589 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 OR5B17Q8NGF7 314 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 ZNF516Q92618 1163 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 KIF12Q96FN5 646 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 CASD1Q96PB1 797 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 PPP1R10Q96QC0 940 aaKnown RBP16.39■□□□□ 0.21
CMC1-201ENST00000334841 FNBP1Q96RU3 617 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 TUBGCP2Q9BSJ2 902 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 MTMR12Q9C0I1 747 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
CMC1-201ENST00000334841 TUBGCP4Q9UGJ1 667 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 C2CD2Q9Y426 696 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 CITO14578 2027 aa16.39■□□□□ 0.21
CMC1-201ENST00000334841 TNRC18O15417 2968 aaPredicted RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 POMCP01189 267 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 PRKCSHP14314 528 aaPredicted RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 TNNI1P19237 187 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 CDK11BP21127 795 aaKnown RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 TFAMQ00059 246 aaKnown RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 SOX4Q06945 474 aaPredicted RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 GRIK3Q13003 919 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 SHHQ15465 462 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 ZBTB6Q15916 424 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 MAN2A1Q16706 1144 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 NOMO2Q5JPE7 1267 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 USP37Q86T82 979 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 C18orf25Q96B23 403 aaPredicted RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 RNPC3Q96LT9 517 aaKnown RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 SLC9A7Q96T83 725 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 UBE2OQ9C0C9 1292 aaKnown RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 TMEM117Q9H0C3 514 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 MTIF3Q9H2K0 278 aaKnown RBP16.38■□□□□ 0.21
CMC1-201ENST00000334841 MMRN2Q9H8L6 949 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 TBC1D13Q9NVG8 400 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 INTS13Q9NVM9 706 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 DERAQ9Y315 318 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.38■□□□□ 0.21
CMC1-201ENST00000334841 SLC4A7Q9Y6M7 1214 aa16.38■□□□□ 0.21
CMC1-201ENST00000334841 TBKBP1A7MCY6 615 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 B4GALT3O60512 393 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 GJB5O95377 273 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 ATP2A2P16615 1042 aaKnown RBP16.37■□□□□ 0.21
CMC1-201ENST00000334841 GCLMP48507 274 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 GUCY2FP51841 1108 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 COPB1P53618 953 aaKnown RBP16.37■□□□□ 0.21
CMC1-201ENST00000334841 MLLT1Q03111 559 aaPredicted RBP16.37■□□□□ 0.21
CMC1-201ENST00000334841 CBWD6Q4V339 395 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 PAN2Q504Q3 1202 aaKnown RBP16.37■□□□□ 0.21
CMC1-201ENST00000334841 CBWD3Q5JTY5 395 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 CBWD5Q5RIA9 395 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 C15orf39Q6ZRI6 1047 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 NT5DC4Q86YG4 428 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 HERC6Q8IVU3 1022 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 ABI1Q8IZP0 508 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 URGCPQ8TCY9 931 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 ZNF689Q96CS4 500 aaPredicted RBP16.37■□□□□ 0.21
CMC1-201ENST00000334841 HCSTQ9UBK5 93 aa16.37■□□□□ 0.21
CMC1-201ENST00000334841 FNDC1Q4ZHG4 1894 aaPredicted RBP16.37■□□□□ 0.21
CMC1-201ENST00000334841 AFPP02771 609 aaKnown RBP16.36■□□□□ 0.21
CMC1-201ENST00000334841 THP07101 528 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 TMEM191BP0C7N4 346 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 FMO5P49326 533 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 FANCCQ00597 558 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 KCNH2Q12809 1159 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 VWA3BQ502W6 1294 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 TDRD10Q5VZ19 366 aaKnown RBP16.36■□□□□ 0.21
CMC1-201ENST00000334841 SCARA3Q6AZY7 606 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 C1orf127Q8N9H9 656 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 CXorf38Q8TB03 319 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 PHOSPHO2Q8TCD6 241 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 TSPAN18Q96SJ8 248 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 VPS16Q9H269 839 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 NDST4Q9H3R1 872 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 GOLGA2P5Q9HBQ8 144 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 TMEM8AQ9HCN3 771 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 CACNG4Q9UBN1 327 aa16.36■□□□□ 0.21
CMC1-201ENST00000334841 UBQLN1Q9UMX0 589 aaKnown RBP16.36■□□□□ 0.21
CMC1-201ENST00000334841 FSD2A1L4K1 749 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 LRRC10BA6NIK2 292 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 AP5Z1O43299 807 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 STX10O60499 249 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 TNNC2P02585 160 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 C4BPAP04003 597 aaKnown RBP16.35■□□□□ 0.21
CMC1-201ENST00000334841 GTF2H1P32780 548 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 MXI1P50539 228 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 AP3M2P53677 418 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 HTRA4P83105 476 aaPredicted RBP16.35■□□□□ 0.21
CMC1-201ENST00000334841 MYL7Q01449 175 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 DSC1Q08554 894 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 DUOXA2Q1HG44 320 aa16.35■□□□□ 0.21
CMC1-201ENST00000334841 ZACNQ401N2 412 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms