RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 NPEPPSP55786 919 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF544Q6NX49 715 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 PMF1Q6P1K2 205 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 FAM173BQ6P4H8 233 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 LINC00523Q86TU6 105 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 WDR36Q8NI36 951 aaKnown RBP5.8□□□□□ -1.48
PTPRB-202ENST00000334414 GLG1Q92896 1179 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 GLMNQ92990 594 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 ZBED2Q9BTP6 218 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 WDR12Q9GZL7 423 aaKnown RBP5.8□□□□□ -1.48
PTPRB-202ENST00000334414 H2AFY2Q9P0M6 372 aaPredicted RBP5.8□□□□□ -1.48
PTPRB-202ENST00000334414 GRID1Q9ULK0 1009 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 TOM1O60784 492 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 UFL1O94874 794 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 LCA5LO95447 670 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 IL6P05231 212 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 GJA8P48165 433 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF200P98182 395 aaPredicted RBP5.8□□□□□ -1.48
PTPRB-202ENST00000334414 TUBA3CQ13748 450 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 FAM83BQ5T0W9 1011 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 PRR23CQ6ZRP0 262 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 MOV10Q9HCE1 1003 aaKnown RBP5.8□□□□□ -1.48
PTPRB-202ENST00000334414 DMAP1Q9NPF5 467 aaPredicted RBP5.8□□□□□ -1.48
PTPRB-202ENST00000334414 OLA1Q9NTK5 396 aaKnown RBP5.8□□□□□ -1.48
PTPRB-202ENST00000334414 TMEM51Q9NW97 253 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 MAD2L2Q9UI95 211 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 CORO1CQ9ULV4 474 aaPredicted RBP5.8□□□□□ -1.48
PTPRB-202ENST00000334414 EFR3BQ9Y2G0 817 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 FIS1Q9Y3D6 152 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 ANKARQ7Z5J8 1434 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 NCOA3Q9Y6Q9 1424 aa5.8□□□□□ -1.48
PTPRB-202ENST00000334414 CDHR2Q9BYE9 1310 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 PECAM1P16284 738 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 C12orf60Q5U649 245 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 KRT28Q7Z3Y7 464 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 GUF1Q8N442 669 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 STKLD1Q8NE28 680 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 LENG1Q96BZ8 264 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 IFT43Q96FT9 208 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 UNC13BO14795 1591 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 RGS20O76081 388 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 IFNA14P01570 189 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 PRKAA2P54646 552 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 SLC12A1Q13621 1099 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 C2CD6Q53TS8 623 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 DDIASQ8IXT1 998 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 DCLK2Q8N568 766 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 UHMK1Q8TAS1 419 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ULK4Q96C45 1275 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 WHRNQ9P202 907 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 WFS1O76024 890 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 UBTFL6P0CB48 400 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 MAGEA10P43363 369 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 MCPH1Q8NEM0 835 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 CAVIN3Q969G5 261 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 KLHL8Q9P2G9 620 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 COBLO75128 1261 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 HK2P52789 917 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 TUBA1BP68363 451 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 KRT24Q2M2I5 525 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 SPANXN2Q5MJ10 180 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 SLC10A5Q5PT55 438 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 TUBA1AQ71U36 451 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 AADATQ8N5Z0 425 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 EIF1ADQ8N9N8 165 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 HIPK4Q8NE63 616 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 UBE2OQ9C0C9 1292 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 RMI1Q9H9A7 625 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 IARS2Q9NSE4 1012 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 CNOT7Q9UIV1 285 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 KITP10721 976 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 BCAP31P51572 246 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 MTTPP55157 894 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ARMC4Q5T2S8 1044 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 LRRC8DQ7L1W4 858 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ATXN2LQ8WWM7 1075 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ZNF184Q99676 751 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 C20orf96Q9NUD7 363 aaPredicted RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 TYK2P29597 1187 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 KDSRQ06136 332 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 PKP1Q13835 747 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ZFP42Q96MM3 310 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 KCND1Q9NSA2 647 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 MYRFQ9Y2G1 1151 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 MAP3K4Q9Y6R4 1608 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 PTPRKQ15262 1439 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 RNF17Q9BXT8 1623 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 VPS4BO75351 444 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 THRAP10827 490 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ATP4AP20648 1035 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 GRK2P25098 689 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 ROR2Q01974 943 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 SF3A3Q12874 501 aaKnown RBP eCLIP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 COX10Q12887 443 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 TSNQ15631 228 aaKnown RBP5.79□□□□□ -1.48
PTPRB-202ENST00000334414 TRIQKQ629K1 86 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 TAF2Q6P1X5 1199 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 OSCP1Q8WVF1 389 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 SUCLG2Q96I99 432 aa5.79□□□□□ -1.48
PTPRB-202ENST00000334414 DAPK2Q9UIK4 370 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms