RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 EIF1ADQ8N9N8 165 aaKnown RBP20.26■□□□□ 0.83
RFTN1-201ENST00000334133 MDM1Q8TC05 714 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 C11orf70Q9BRQ4 267 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 SEMA4AQ9H3S1 761 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 C17orf75Q9HAS0 396 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 APOBEC3GQ9HC16 384 aaKnown RBP20.26■□□□□ 0.83
RFTN1-201ENST00000334133 RBAKQ9NYW8 714 aaPredicted RBP20.26■□□□□ 0.83
RFTN1-201ENST00000334133 GRHL1Q9NZI5 618 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 DOCK1Q14185 1865 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 PMM2O15305 246 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 EXTL3O43909 919 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 CAND2O75155 1236 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 VNN1O95497 513 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 WDR44Q5JSH3 913 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 USP37Q86T82 979 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 PCDHA3Q9Y5H8 950 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 OATP04181 439 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 GARTP22102 1010 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 SSR1P43307 286 aaKnown RBP20.25■□□□□ 0.83
RFTN1-201ENST00000334133 VPS41P49754 854 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 RWDD2BP57060 319 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 ZBTB10Q96DT7 871 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 MSTO1Q9BUK6 570 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 EPB41L4BQ9H329 900 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 USTQ9Y2C2 406 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 POLR2AP24928 1970 aaKnown RBP20.25■□□□□ 0.83
RFTN1-201ENST00000334133 C19orf81C9J6K1 198 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 MTMR3Q13615 1198 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 NCAPG2Q86XI2 1143 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 TRIM50Q86XT4 487 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 NLGN2Q8NFZ4 835 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 PSPC1Q8WXF1 523 aaKnown RBP20.25■□□□□ 0.83
RFTN1-201ENST00000334133 RNF25Q96BH1 459 aaPredicted RBP20.25■□□□□ 0.83
RFTN1-201ENST00000334133 HOXC10Q9NYD6 342 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 AFG3L2Q9Y4W6 797 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 FAM169AQ9Y6X4 670 aa20.25■□□□□ 0.83
RFTN1-201ENST00000334133 CTNNA2P26232 953 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 CHRNA3P32297 505 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 PMS2P54278 862 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 DHX34Q14147 1143 aaKnown RBP20.24■□□□□ 0.83
RFTN1-201ENST00000334133 SLC29A2Q14542 456 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 PTGISQ16647 500 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 ZNF394Q53GI3 561 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 SLC7A3Q8WY07 619 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 CDHR1Q96JP9 859 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 RASAL2Q9UJF2 1139 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 PCDHB4Q9Y5E5 795 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 DKC1O60832 514 aaKnown RBP eCLIP20.24■□□□□ 0.83
RFTN1-201ENST00000334133 PPFIA2O75334 1257 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
RFTN1-201ENST00000334133 TNFSF9P41273 254 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 SIX1Q15475 284 aaPredicted RBP20.24■□□□□ 0.83
RFTN1-201ENST00000334133 CDR2LQ86X02 465 aaPredicted RBP20.24■□□□□ 0.83
RFTN1-201ENST00000334133 MCOLN2Q8IZK6 566 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 CHST7Q9NS84 486 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 KLHL11Q9NVR0 708 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 PNMA2Q9UL42 364 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 MROH7Q68CQ1 1323 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 MYPNQ86TC9 1320 aa20.24■□□□□ 0.83
RFTN1-201ENST00000334133 C4BPAP04003 597 aaKnown RBP20.23■□□□□ 0.83
RFTN1-201ENST00000334133 UNGP13051 313 aaPredicted RBP20.23■□□□□ 0.83
RFTN1-201ENST00000334133 UBA1P22314 1058 aaKnown RBP20.23■□□□□ 0.83
RFTN1-201ENST00000334133 OAZ1P54368 228 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 ZACNQ401N2 412 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 C12orf42Q96LP6 360 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 TCHPQ9BT92 498 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 NFASCO94856 1347 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 FAM187AA6NFU0 413 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 MTA2O94776 668 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 GCNT1Q02742 428 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 VGLL4Q14135 290 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 PPP1R7Q15435 360 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 LY6KQ17RY6 165 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 RUFY4Q6ZNE9 571 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 C15orf39Q6ZRI6 1047 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 RASSF4Q9H2L5 321 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 UVRAGQ9P2Y5 699 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 ARID2Q68CP9 1835 aa20.23■□□□□ 0.83
RFTN1-201ENST00000334133 ERLIN2O94905 339 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 SRGAP2CP0DJJ0 459 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 NSFP46459 744 aaKnown RBP20.22■□□□□ 0.83
RFTN1-201ENST00000334133 LIG3P49916 1009 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
RFTN1-201ENST00000334133 APOBEC3FQ8IUX4 373 aaKnown RBP20.22■□□□□ 0.83
RFTN1-201ENST00000334133 CCDC50Q8IVM0 306 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 TMEM130Q8N3G9 435 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 PCYT2Q99447 389 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 EPN3Q9H201 632 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 PORCNQ9H237 461 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 MTUS1Q9ULD2 1270 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 NUB1Q9Y5A7 615 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 GTF2H1P32780 548 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 PSMD6Q15008 389 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 PRUNE1Q86TP1 453 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 CCT8L2Q96SF2 557 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 TXLNGYQ9BZA5 131 aa20.22■□□□□ 0.83
RFTN1-201ENST00000334133 MAFBQ9Y5Q3 323 aaPredicted RBP20.22■□□□□ 0.83
RFTN1-201ENST00000334133 PGK2P07205 417 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms