RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 RPL21P46778 160 aaKnown RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 AP3M2P53677 418 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 IFFO1Q0D2I5 559 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 GRM1Q13255 1194 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 PLCB4Q15147 1175 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 DALRD3Q5D0E6 543 aaKnown RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 C6orf118Q5T5N4 469 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 MFSD5Q6N075 450 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 POTEHQ6S545 545 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 C6orf89Q6UWU4 347 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 CATSPERGQ6ZRH7 1159 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 TRMT10CQ7L0Y3 403 aaKnown RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 CCDC60Q8IWA6 550 aaPredicted RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 CHST13Q8NET6 341 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 OR2W6PQ8NHA6 318 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 GRK7Q8WTQ7 553 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 C18orf8Q96DM3 657 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 NIFKQ9BYG3 293 aaKnown RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 POLR3FQ9H1D9 316 aaPredicted RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 CCDC134Q9H6E4 229 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 DHX33Q9H6R0 707 aaKnown RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 TMEM134Q9H6X4 195 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 PICK1Q9NRD5 415 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 CYP39A1Q9NYL5 469 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 HACL1Q9UJ83 578 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 MAFBQ9Y5Q3 323 aaPredicted RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 IGKV6D-21A0A0A0MT36 114 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 NFKBIEO00221 500 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 PSTPIP1O43586 416 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 KIAA0754O94854 1291 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 RARAP10276 462 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 TBXAS1P24557 533 aaPredicted RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 RFC5P40937 340 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 MMP13P45452 471 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 PLTPP55058 493 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 EMC2Q15006 297 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 WDR44Q5JSH3 913 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 SWSAP1Q6NVH7 229 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 MON1BQ7L1V2 547 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 TATDN2Q93075 761 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 KIFC3Q9BVG8 833 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 PORCNQ9H237 461 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 TOPORSQ9NS56 1045 aaPredicted RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 SEPT9Q9UHD8 586 aaPredicted RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 NOVA2Q9UNW9 492 aaKnown RBP11.49□□□□□ -0.57
CCDC172-201ENST00000333254 SNX24Q9Y343 169 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 ANK1P16157 1881 aa11.49□□□□□ -0.57
CCDC172-201ENST00000333254 ZSWIM8A7E2V4 1837 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 TMEM110-MUSTN1A8MSY1 372 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 ITIH2P19823 946 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 ACO1P21399 889 aaKnown RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 MAPK4P31152 587 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 HPDP32754 393 aaPredicted RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 ARL2P36404 184 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 LIG4P49917 911 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 MAGOHP61326 146 aaKnown RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 STRN3Q13033 797 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 PTK6Q13882 451 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 TTC31Q49AM3 519 aaPredicted RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 ERMARDQ5T6L9 678 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 RHBDF2Q6PJF5 856 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 CEP128Q6ZU80 1094 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 TAX1BP1Q86VP1 789 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 PHF13Q86YI8 300 aaPredicted RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 ZNF516Q92618 1163 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 RNF25Q96BH1 459 aaPredicted RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 CYFIP2Q96F07 1278 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 WNK4Q96J92 1243 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 CGRRF1Q99675 332 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 SH2D3AQ9BRG2 576 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 FOXP3Q9BZS1 431 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 TRIM31Q9BZY9 425 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 MRPL47Q9HD33 250 aaKnown RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
CCDC172-201ENST00000333254 HOXC10Q9NYD6 342 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 MROH7Q68CQ1 1323 aa11.48□□□□□ -0.57
CCDC172-201ENST00000333254 E7EVH7 732 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 FZD9O00144 591 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
CCDC172-201ENST00000333254 RIPK2O43353 540 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 TCEA3O75764 348 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 PROSCO94903 275 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 EGFRP00533 1210 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 HLA-DRAP01903 254 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 OATP04181 439 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 COPB2P35606 906 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 BAG6P46379 1132 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 CALCOCO2Q13137 446 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 DGKZQ13574 1117 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 TMEM132BQ14DG7 1078 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 LIN9Q5TKA1 542 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 TTC19Q6DKK2 380 aaPredicted RBP11.47□□□□□ -0.57
CCDC172-201ENST00000333254 AADACL2Q6P093 401 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 RELL1Q8IUW5 271 aa11.47□□□□□ -0.57
CCDC172-201ENST00000333254 CCDC105Q8IYK2 499 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms