RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 MCL1Q07820 350 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 RAB33AQ14088 237 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 ZMAT2Q96NC0 199 aaKnown RBP19.42■□□□□ 0.7
HDDC3-201ENST00000330334 BACH2Q9BYV9 841 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 CCSER1Q9C0I3 900 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 BLOC1S4Q9NUP1 217 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.42■□□□□ 0.7
HDDC3-201ENST00000330334 EPS15L1Q9UBC2 864 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 FBXW11Q9UKB1 542 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 BACE2Q9Y5Z0 518 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 CLUHO75153 1309 aa19.42■□□□□ 0.7
HDDC3-201ENST00000330334 DENND4AQ7Z401 1863 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 CLDN3O15551 220 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 POU2F2P09086 479 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 HNRNPA1P09651 372 aaKnown RBP eCLIP19.41■□□□□ 0.7
HDDC3-201ENST00000330334 ABCD1P33897 745 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 OSTNP61366 133 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 TDGQ13569 410 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 NOLC1Q14978 699 aaKnown RBP eCLIP19.41■□□□□ 0.7
HDDC3-201ENST00000330334 UVSSAQ2YD98 709 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 NXPE3Q969Y0 559 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 ZBTB45Q96K62 511 aaPredicted RBP19.41■□□□□ 0.7
HDDC3-201ENST00000330334 PLEKHA5Q9HAU0 1116 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 KCNK12Q9HB15 430 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 MTRRQ9UBK8 725 aa19.41■□□□□ 0.7
HDDC3-201ENST00000330334 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.41■□□□□ 0.7
HDDC3-201ENST00000330334 PLXNA3P51805 1871 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 NPHP3-ACAD11A0A0J9YXS1 232 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 N4BP1O75113 896 aaKnown RBP19.4■□□□□ 0.7
HDDC3-201ENST00000330334 IGFBP6P24592 240 aaPredicted RBP19.4■□□□□ 0.7
HDDC3-201ENST00000330334 DDIT3P35638 169 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 SOX4Q06945 474 aaPredicted RBP19.4■□□□□ 0.7
HDDC3-201ENST00000330334 KYAT1Q16773 422 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 SLC10A6Q3KNW5 377 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 ANKS3Q6ZW76 656 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 HAUS6Q7Z4H7 955 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 GPBP1Q86WP2 473 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 GLYCTKQ8IVS8 523 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 C3orf58Q8NDZ4 430 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 LRRC15Q8TF66 581 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 RAD54LQ92698 747 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 REEP2Q9BRK0 252 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 PIDD1Q9HB75 910 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 PARVGQ9HBI0 331 aa19.4■□□□□ 0.7
HDDC3-201ENST00000330334 MORC2Q9Y6X9 1032 aaPredicted RBP19.4■□□□□ 0.7
HDDC3-201ENST00000330334 MTCL1Q9Y4B5 1905 aaKnown RBP19.39■□□□□ 0.7
HDDC3-201ENST00000330334 VPS37CA5D8V6 355 aaPredicted RBP19.39■□□□□ 0.69
HDDC3-201ENST00000330334 MEFVO15553 781 aaPredicted RBP19.39■□□□□ 0.69
HDDC3-201ENST00000330334 ADAM12O43184 909 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 PIGRP01833 764 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 CLTAP09496 248 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 PLCG1P19174 1290 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 SYT1P21579 422 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 AVPR2P30518 371 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 GRIN1Q05586 938 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 KARSQ15046 597 aaKnown RBP19.39■□□□□ 0.69
HDDC3-201ENST00000330334 PTPAQ15257 358 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 LIN9Q5TKA1 542 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 TSPAN18Q96SJ8 248 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 GOLGA2P5Q9HBQ8 144 aa19.39■□□□□ 0.69
HDDC3-201ENST00000330334 ZFP37Q9Y6Q3 630 aaPredicted RBP19.39■□□□□ 0.69
HDDC3-201ENST00000330334 PODXLO00592 558 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 SYN3O14994 580 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 MYBP10242 640 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 OR1D2P34982 312 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 NHLH1Q02575 133 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 IER5LQ5T953 404 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 C2orf16Q68DN1 1984 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 MYCT1Q8N699 235 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 ANKFY1Q9P2R3 1169 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 TBX20Q9UMR3 447 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 DUSP12Q9UNI6 340 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 SRPRBQ9Y5M8 271 aaKnown RBP19.38■□□□□ 0.69
HDDC3-201ENST00000330334 CLIC4Q9Y696 253 aa19.38■□□□□ 0.69
HDDC3-201ENST00000330334 TRAK2O60296 914 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 FAM13AO94988 1023 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 C8AP07357 584 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 LAMP2P13473 410 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 TKTP29401 623 aaKnown RBP19.37■□□□□ 0.69
HDDC3-201ENST00000330334 GBP2P32456 591 aaPredicted RBP19.37■□□□□ 0.69
HDDC3-201ENST00000330334 PTPN5P54829 565 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 CACNB1Q02641 598 aaPredicted RBP19.37■□□□□ 0.69
HDDC3-201ENST00000330334 RESTQ13127 1097 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 MCM6Q14566 821 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 PPM1LQ5SGD2 360 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 SLC8B1Q6J4K2 584 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 RASSF8Q8NHQ8 419 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 LARP4BQ92615 738 aaKnown RBP19.37■□□□□ 0.69
HDDC3-201ENST00000330334 MYADMQ96S97 322 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 HAPLN2Q9GZV7 340 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 ST6GALNAC4Q9H4F1 302 aa19.37■□□□□ 0.69
HDDC3-201ENST00000330334 TTC26A0AVF1 554 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 TBC1D4O60343 1298 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 XYLBO75191 536 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 ADRB2P07550 413 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 CYP3A5P20815 502 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 BRCC3P46736 316 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 VCPP55072 806 aaKnown RBP19.36■□□□□ 0.69
HDDC3-201ENST00000330334 GTF2BQ00403 316 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 MRPL58Q14197 206 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms