RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 TRAPPC3O43617 180 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 HNRNPA1P09651 372 aaKnown RBP eCLIP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 PLA2G4BP0C869 781 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 HARSP12081 509 aaKnown RBP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 LAMP2P13473 410 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 PLS3P13797 630 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 PROZP22891 400 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 BRCC3P46736 316 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 CLCN5P51795 746 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 NUBP1P53384 320 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 SMTNP53814 917 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 SLC12A3P55017 1021 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 STRN3Q13033 797 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 RAB33AQ14088 237 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 PPM1LQ5SGD2 360 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 LIN9Q5TKA1 542 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 MPZL3Q6UWV2 235 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 GET4Q7L5D6 327 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 GRASPQ7Z6J2 395 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 KCTD17Q8N5Z5 321 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 C3orf58Q8NDZ4 430 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 TMEM161BQ8NDZ6 487 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 ST13P5Q8NFI4 369 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 SPIRE2Q8WWL2 714 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 ATOH1Q92858 354 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 DDX27Q96GQ7 796 aaKnown RBP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 ZMAT2Q96NC0 199 aaKnown RBP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 KCNG1Q9UIX4 513 aa15.47■□□□□ 0.07
RPAIN-201ENST00000327154 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-201ENST00000327154 PLXNA3P51805 1871 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 CCL16O15467 120 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 GALR2O43603 387 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-201ENST00000327154 TOM1L1O75674 476 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 C8AP07357 584 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 NPR3P17342 541 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 FSHRP23945 695 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 TKTP29401 623 aaKnown RBP15.46■□□□□ 0.07
RPAIN-201ENST00000327154 NTHL1P78549 312 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-201ENST00000327154 TMEM119Q4V9L6 283 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 SEZ6Q53EL9 994 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 ARSHQ5FYA8 562 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 AXDND1Q5T1B0 1012 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-201ENST00000327154 RSPO2Q6UXX9 243 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-201ENST00000327154 SIX5Q8N196 739 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 NXPE3Q969Y0 559 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 SNX27Q96L92 541 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 IRF2BPLQ9H1B7 796 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 SLC38A7Q9NVC3 462 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 ANKFY1Q9P2R3 1169 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 MTRRQ9UBK8 725 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 POLIQ9UNA4 740 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 CDY1Q9Y6F8 540 aa15.46■□□□□ 0.07
RPAIN-201ENST00000327154 PODXLO00592 558 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 MEFVO15553 781 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-201ENST00000327154 PI15O43692 258 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 CFHP08603 1231 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 MAPTP10636 758 aaKnown RBP15.45■□□□□ 0.06
RPAIN-201ENST00000327154 KCNE1P15382 129 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 ANKS3Q6ZW76 656 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 SLC7A14Q8TBB6 771 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 C18orf25Q96B23 403 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-201ENST00000327154 AK8Q96MA6 479 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 KCND2Q9NZV8 630 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 CNTN3Q9P232 1028 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 WNT16Q9UBV4 365 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 BACE2Q9Y5Z0 518 aa15.45■□□□□ 0.06
RPAIN-201ENST00000327154 DENND4AQ7Z401 1863 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 C2orf16Q68DN1 1984 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 ANHXE9PGG2 379 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 STK25O00506 426 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 XYLBO75191 536 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 HOXA9P31269 272 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 RPL9P32969 192 aaKnown RBP15.44■□□□□ 0.06
RPAIN-201ENST00000327154 UBA7P41226 1012 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 DHX8Q14562 1220 aaKnown RBP15.44■□□□□ 0.06
RPAIN-201ENST00000327154 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 SLC10A6Q3KNW5 377 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 CWF19L1Q69YN2 538 aaKnown RBP15.44■□□□□ 0.06
RPAIN-201ENST00000327154 ZPBP2Q6X784 338 aa15.44■□□□□ 0.06
RPAIN-201ENST00000327154 LARSQ9P2J5 1176 aaKnown RBP15.44■□□□□ 0.06
RPAIN-201ENST00000327154 CLDN3O15551 220 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 SRFP11831 508 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 MATR3P43243 847 aaKnown RBP eCLIP15.43■□□□□ 0.06
RPAIN-201ENST00000327154 GRIN1Q05586 938 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 MCL1Q07820 350 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 HTR4Q13639 388 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 NOLC1Q14978 699 aaKnown RBP eCLIP15.43■□□□□ 0.06
RPAIN-201ENST00000327154 VARS2Q5ST30 1063 aaKnown RBP15.43■□□□□ 0.06
RPAIN-201ENST00000327154 HAUS6Q7Z4H7 955 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 GPBP1Q86WP2 473 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 ITFG1Q8TB96 612 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 CALML4Q96GE6 196 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 RPP25Q9BUL9 199 aaKnown RBP15.43■□□□□ 0.06
RPAIN-201ENST00000327154 HAPLN2Q9GZV7 340 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 HCFC1R1Q9NWW0 138 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 CDH7Q9ULB5 785 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 NUB1Q9Y5A7 615 aa15.43■□□□□ 0.06
RPAIN-201ENST00000327154 ZFP37Q9Y6Q3 630 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-201ENST00000327154 NUMBLQ9Y6R0 609 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms