RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TTC17Q96AE7 1141 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 SLITRK6Q9H5Y7 841 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 TBC1D22BQ9NU19 505 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 STOML1Q9UBI4 398 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 ZFP69BQ9UJL9 534 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 SLIT3O75094 1523 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 PEX10O60683 326 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 CCND1P24385 295 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 ELF3P78545 371 aaPredicted RBP16.19■□□□□ 0.18
VARS2-201ENST00000321897 GPS1Q13098 491 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 RSBN1LQ6PCB5 846 aaPredicted RBP16.19■□□□□ 0.18
VARS2-201ENST00000321897 RTKN2Q8IZC4 609 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 BAP1Q92560 729 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 SMYD3Q9H7B4 428 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 TUFT1Q9NNX1 390 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 VCX3AQ9NNX9 186 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 CPP00450 1065 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 ZCCHC18P0CG32 403 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 KRT10P13645 584 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 PSMA2P25787 234 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 CDR2Q01850 454 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 KIF22Q14807 665 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 GRAMD1BQ3KR37 738 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 ZNF720Q7Z2F6 126 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 SPATA24Q86W54 205 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 FAM161BQ96MY7 647 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 ZCWPW1Q9H0M4 648 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 RNF19AQ9NV58 838 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 HAO1Q9UJM8 370 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 C15orf41Q9Y2V0 281 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 ATRNO75882 1429 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 PITPNM2Q9BZ72 1349 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 TLR2O60603 784 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 PSMC4P43686 418 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 CPA2P48052 419 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 ALDH5A1P51649 535 aaPredicted RBP16.18■□□□□ 0.18
VARS2-201ENST00000321897 PPATQ06203 517 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 TMEM62Q0P6H9 643 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 KCTD6Q8NC69 237 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 KRT35Q92764 455 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 TATDN2Q93075 761 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 CNOT7Q9UIV1 285 aaKnown RBP16.18■□□□□ 0.18
VARS2-201ENST00000321897 SUGT1Q9Y2Z0 365 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 COMMD10Q9Y6G5 202 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 PLCB4Q15147 1175 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 ARSHQ5FYA8 562 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 AGBL2Q5U5Z8 902 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 ANGEL2Q5VTE6 544 aaKnown RBP16.18■□□□□ 0.18
VARS2-201ENST00000321897 LLGL2Q6P1M3 1020 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 GRK7Q8WTQ7 553 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 FAM151AQ8WW52 585 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 CCDC124Q96CT7 223 aaKnown RBP16.18■□□□□ 0.18
VARS2-201ENST00000321897 DEFB129Q9H1M3 183 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 SEMA4AQ9H3S1 761 aa16.18■□□□□ 0.18
VARS2-201ENST00000321897 F8VZ95 297 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 DNM1LO00429 736 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 MARCKSL1P49006 195 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 BPIFB4P59827 614 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 HADHQ16836 314 aaKnown RBP16.17■□□□□ 0.18
VARS2-201ENST00000321897 ARHGEF19Q8IW93 802 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 IL31RAQ8NI17 732 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 SEL1LQ9UBV2 794 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 TRIM33Q9UPN9 1127 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 DCDC2CA8MYV0 355 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 KITP10721 976 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 HSPA9P38646 679 aaKnown RBP16.17■□□□□ 0.18
VARS2-201ENST00000321897 NUMBP49757 651 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 CCNHP51946 323 aaPredicted RBP16.17■□□□□ 0.18
VARS2-201ENST00000321897 WDR72Q3MJ13 1102 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 TMEM119Q4V9L6 283 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 FIGNQ5HY92 759 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 NLRP7Q8WX94 980 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 JPH1Q9HDC5 661 aaPredicted RBP16.17■□□□□ 0.18
VARS2-201ENST00000321897 COL1A1P02452 1464 aaPredicted RBP16.17■□□□□ 0.18
VARS2-201ENST00000321897 TRAPPC3O43617 180 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 PPFIA2O75334 1257 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 PLS3P13797 630 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 KCNA3P22001 575 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 COPS2P61201 443 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 KRT76Q01546 638 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 ZNF568Q3ZCX4 644 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 ARMC3Q5W041 872 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 ZBED8Q8IZ13 594 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 CCNYQ8ND76 341 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 DNAJC9Q8WXX5 260 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 CFAP36Q96G28 342 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 MIS12Q9H081 205 aa16.17■□□□□ 0.18
VARS2-201ENST00000321897 EPHB1P54762 984 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 SLC12A3P55017 1021 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 PRKCEQ02156 737 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 NBPF12Q5TAG4 269 aaPredicted RBP16.16■□□□□ 0.18
VARS2-201ENST00000321897 CYP4A22Q5TCH4 519 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 DARS2Q6PI48 645 aaKnown RBP16.16■□□□□ 0.18
VARS2-201ENST00000321897 TMEM237Q96Q45 408 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 SMARCA1P28370 1054 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 ITIH3Q06033 890 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 ITGB3BPQ13352 177 aaPredicted RBP16.16■□□□□ 0.18
VARS2-201ENST00000321897 KCNT1Q5JUK3 1230 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms