RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CHMP2BQ9UQN3 213 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 TMEM120BA0PK00 339 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 CCNA1P78396 465 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 PAPD7Q5XG87 772 aaKnown RBP17.47■□□□□ 0.39
CLIP4-201ENST00000320081 LRRC37BQ96QE4 947 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 TTC1Q99614 292 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 GLIS2Q9BZE0 524 aaPredicted RBP17.47■□□□□ 0.39
CLIP4-201ENST00000320081 A0A1W2PQJ5 194 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 A8MXQ7 604 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 SH3BP5O60239 455 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 DGAT1O75907 488 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 IREB2P48200 963 aaKnown RBP17.47■□□□□ 0.39
CLIP4-201ENST00000320081 NT5C2P49902 561 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 GMPSP49915 693 aaPredicted RBP17.47■□□□□ 0.39
CLIP4-201ENST00000320081 ITGA8P53708 1063 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 MMGT1Q8N4V1 131 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 SNF8Q96H20 258 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 GBP5Q96PP8 586 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 FGFBP2Q9BYJ0 223 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 PPP1R9AQ9ULJ8 1098 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 SUGT1Q9Y2Z0 365 aa17.47■□□□□ 0.39
CLIP4-201ENST00000320081 PITPNM2Q9BZ72 1349 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 PRKCBP05771 671 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 ATXN3P54252 364 aaPredicted RBP17.46■□□□□ 0.39
CLIP4-201ENST00000320081 HABP4Q5JVS0 413 aaKnown RBP17.46■□□□□ 0.39
CLIP4-201ENST00000320081 DSTYKQ6XUX3 929 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 SH3RF1Q7Z6J0 888 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 SCN4BQ8IWT1 228 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 CERS5Q8N5B7 392 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 C1orf131Q8NDD1 294 aaKnown RBP17.46■□□□□ 0.39
CLIP4-201ENST00000320081 EPN3Q9H201 632 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 RNF181Q9P0P0 153 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 LCMT1Q9UIC8 334 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 COL5A2P05997 1499 aaPredicted RBP17.46■□□□□ 0.39
CLIP4-201ENST00000320081 GYG2O15488 501 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 PGK2P07205 417 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 RNASELQ05823 741 aaKnown RBP17.46■□□□□ 0.39
CLIP4-201ENST00000320081 TSEN2Q8NCE0 465 aaKnown RBP17.46■□□□□ 0.39
CLIP4-201ENST00000320081 TATDN2Q93075 761 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 MRPL4Q9BYD3 311 aaKnown RBP17.46■□□□□ 0.39
CLIP4-201ENST00000320081 SLC24A3Q9HC58 644 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 FBXO40Q9UH90 709 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 CAND2O75155 1236 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 DNAJC3Q13217 504 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 LRRC36Q1X8D7 754 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 RNF135Q8IUD6 432 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 RAB6BQ9NRW1 208 aa17.46■□□□□ 0.39
CLIP4-201ENST00000320081 TBX3O15119 743 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 ATP9BO43861 1147 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 ENTPD3O75355 529 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 PDGFRAP16234 1089 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 EMC2Q15006 297 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 R3HDM1Q15032 1099 aaKnown RBP17.45■□□□□ 0.38
CLIP4-201ENST00000320081 DAB2IPQ5VWQ8 1189 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 GPAT2Q6NUI2 795 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 SHCBP1LQ9BZQ2 653 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 FAM187AA6NFU0 413 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 GOLGA8CPA6NN73 597 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 MAPK13O15264 365 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 CST8O60676 142 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 YY1P25490 414 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 OVGP1Q12889 678 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 APOBEC3HQ6NTF7 200 aaKnown RBP17.45■□□□□ 0.38
CLIP4-201ENST00000320081 KIRREL3Q8IZU9 778 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 ATL2Q8NHH9 583 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 HNRNPLLQ8WVV9 542 aaKnown RBP17.45■□□□□ 0.38
CLIP4-201ENST00000320081 NUF2Q9BZD4 464 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 SEMA4AQ9H3S1 761 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 SUCLA2Q9P2R7 463 aaPredicted RBP17.45■□□□□ 0.38
CLIP4-201ENST00000320081 RIMBP3CA6NJZ7 1639 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 RIMBP3BA6NNM3 1639 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 RIMBP3Q9UFD9 1639 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 SLIT1O75093 1534 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 KLRC4O43908 158 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 EIF3EP60228 445 aaKnown RBP17.45■□□□□ 0.38
CLIP4-201ENST00000320081 AP1B1Q10567 949 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 TKFCQ3LXA3 575 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 CCDC117Q8IWD4 279 aaPredicted RBP17.45■□□□□ 0.38
CLIP4-201ENST00000320081 EMC1Q8N766 993 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 CCNYL1Q8N7R7 359 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 ZNF280CQ8ND82 737 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 FAM193BQ96PV7 902 aaPredicted RBP17.45■□□□□ 0.38
CLIP4-201ENST00000320081 VIPAS39Q9H9C1 493 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 TLK1Q9UKI8 766 aa17.45■□□□□ 0.38
CLIP4-201ENST00000320081 GMNNO75496 209 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 TMEM253P0C7T8 217 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 CPA2P48052 419 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 RHBDL3P58872 404 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 HIF1AQ16665 826 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 XKR3Q5GH77 459 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 NBPF12Q5TAG4 269 aaPredicted RBP17.44■□□□□ 0.38
CLIP4-201ENST00000320081 NPHS2Q9NP85 383 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 PHF2O75151 1096 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 CTSHP09668 335 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 OSBPP22059 807 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 NPTX2P47972 431 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 KDSRQ06136 332 aa17.44■□□□□ 0.38
CLIP4-201ENST00000320081 BYSLQ13895 437 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms