RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ADRB2P07550 413 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 MYBL1P10243 752 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 RBM5P52756 815 aaKnown RBP eCLIP14.33□□□□□ -0.12
SKA3-202ENST00000314759 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 TRIM68Q6AZZ1 485 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 ECHDC2Q86YB7 292 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 ELMO3Q96BJ8 720 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 MAGEB18Q96M61 343 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 PLVAPQ9BX97 442 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 KLHL14Q9P2G3 628 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 A6NHS1 94 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 VIL1P09327 827 aaKnown RBP14.33□□□□□ -0.12
SKA3-202ENST00000314759 CCNB1P14635 433 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 ADCY8P40145 1251 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 VPS41P49754 854 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 MFAP3P55082 362 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 MKRN3Q13064 507 aaKnown RBP14.33□□□□□ -0.12
SKA3-202ENST00000314759 MTFR1Q15390 333 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 TAF11Q15544 211 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 RNF43Q68DV7 783 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 CCDC174Q6PII3 467 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 DDX1Q92499 740 aaKnown RBP14.33□□□□□ -0.12
SKA3-202ENST00000314759 TRAIPQ9BWF2 469 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 TEKT3Q9BXF9 490 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 LGALS13Q9UHV8 139 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 ANAPC5Q9UJX4 755 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 R3HDM2Q9Y2K5 976 aaKnown RBP14.33□□□□□ -0.12
SKA3-202ENST00000314759 GOLGB1Q14789 3259 aaKnown RBP14.33□□□□□ -0.12
SKA3-202ENST00000314759 LRRC37AA6NMS7 1700 aa14.33□□□□□ -0.12
SKA3-202ENST00000314759 PMM2O15305 246 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 TAC1P20366 129 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 CALRP27797 417 aaKnown RBP14.32□□□□□ -0.12
SKA3-202ENST00000314759 FOXN2P32314 431 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 STAT2P52630 851 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 ACAD10Q6JQN1 1059 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 ARHGEF18Q6ZSZ5 1173 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 HELQQ8TDG4 1101 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 DCLK3Q9C098 648 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 ANAPC7Q9UJX3 599 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 ADGRA3Q8IWK6 1321 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 G3V3G9 751 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 CALCAP01258 141 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 ATF2P15336 505 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 ECE1P42892 770 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 DCAF8Q5TAQ9 597 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 SYDE1Q6ZW31 735 aaPredicted RBP14.32□□□□□ -0.12
SKA3-202ENST00000314759 CBWD2Q8IUF1 395 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 DHX38Q92620 1227 aaKnown RBP14.32□□□□□ -0.12
SKA3-202ENST00000314759 NAF1Q96HR8 494 aaKnown RBP14.32□□□□□ -0.12
SKA3-202ENST00000314759 SH2D3AQ9BRG2 576 aa14.32□□□□□ -0.12
SKA3-202ENST00000314759 POLRMTO00411 1230 aaKnown RBP14.31□□□□□ -0.12
SKA3-202ENST00000314759 UNC5CO95185 931 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 MAPK4P31152 587 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 LACTBP83111 547 aaPredicted RBP14.31□□□□□ -0.12
SKA3-202ENST00000314759 ATP11AP98196 1134 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 TBC1D10BQ4KMP7 808 aaPredicted RBP14.31□□□□□ -0.12
SKA3-202ENST00000314759 CCDC127Q96BQ5 260 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 C8orf37Q96NL8 207 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 OSBPL1AQ9BXW6 950 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 DBNDD1Q9H9R9 158 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 ETNK1Q9HBU6 452 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 NKIRAS1Q9NYS0 192 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 PKD2L1Q9P0L9 805 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 NEU2Q9Y3R4 380 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 MAP3K13O43283 966 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 SORBS3O60504 671 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 CDH16O75309 829 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 AP1G2O75843 785 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 GAS8O95995 478 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 MAPTP10636 758 aaKnown RBP14.31□□□□□ -0.12
SKA3-202ENST00000314759 PLS3P13797 630 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 CAV1Q03135 178 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 ALCAMQ13740 583 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 RBM26Q5T8P6 1007 aaKnown RBP14.31□□□□□ -0.12
SKA3-202ENST00000314759 HAUS6Q7Z4H7 955 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 ATL2Q8NHH9 583 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 NGLY1Q96IV0 654 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 C9orf72Q96LT7 481 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 PITPNM3Q9BZ71 974 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 DPPA5A6NC42 116 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 MAPK13O15264 365 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 RRM1P23921 792 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 SKIV2L2P42285 1042 aaKnown RBP14.31□□□□□ -0.12
SKA3-202ENST00000314759 TUBP50607 506 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 WDR4P57081 412 aaKnown RBP14.31□□□□□ -0.12
SKA3-202ENST00000314759 STRN3Q13033 797 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 ACVR2BQ13705 512 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 DAB2IPQ5VWQ8 1189 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 FAM47EQ6ZV65 393 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 PHLDB2Q86SQ0 1253 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 PRUNE1Q86TP1 453 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 GRK7Q8WTQ7 553 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 SH3GL3Q99963 347 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 FAM118BQ9BPY3 351 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 HEMGNQ9BXL5 484 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 EURLQ9NYK6 297 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 ZFATQ9P243 1243 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 LY75O60449 1722 aa14.31□□□□□ -0.12
SKA3-202ENST00000314759 MAN1A1P33908 653 aa14.3□□□□□ -0.12
SKA3-202ENST00000314759 CCNG1P51959 295 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms