RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 C9orf72Q96LT7 481 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 OGTO15294 1046 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ZNF131P52739 623 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SNRPFP62306 86 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SAMD3Q8N6K7 520 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 C1orf131Q8NDD1 294 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 STK38LQ9Y2H1 464 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 KNDC1Q76NI1 1749 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 NPM3O75607 178 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 MT-ND3P03897 115 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CLK2P49760 499 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 GUCY1A3Q02108 690 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 TMEM132BQ14DG7 1078 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 TAF1CQ15572 869 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ANKRD20A3Q5VUR7 823 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 ZBED1O96006 694 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SNAPC2Q13487 334 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 IER5Q5VY09 327 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 SLC47A2Q86VL8 602 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CCDC125Q86Z20 511 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 THOC1Q96FV9 657 aaKnown RBP6.58□□□□□ -1.36
PRKDC-201ENST00000314191 CYP39A1Q9NYL5 469 aa6.58□□□□□ -1.36
PRKDC-201ENST00000314191 NAMPTP43490 491 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 TRIM72Q6ZMU5 477 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 MOB2Q70IA6 237 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SRRM1Q8IYB3 904 aaKnown RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 BEST2Q8NFU1 509 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 NACA2Q9H009 215 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 C17orf75Q9HAS0 396 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ZNF446Q9NWS9 450 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 PIN4Q9Y237 131 aaKnown RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 TLR2O60603 784 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 BRAFP15056 766 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SAT1P21673 171 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 IRX4P78413 519 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 KCTD19Q17RG1 926 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CENPUQ71F23 418 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CCDC60Q8IWA6 550 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 GPATCH11Q8N954 259 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 OR6J1Q8NGC5 347 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 IFT122Q9HBG6 1241 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 STRIP2Q9ULQ0 834 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 IGLV3-22A0A075B6J6 115 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CYP24A1Q07973 514 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 MTM1Q13496 603 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CUL2Q13617 745 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 KYNUQ16719 465 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 NIPA1Q7RTP0 329 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SLC13A5Q86YT5 568 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ARHGEF26Q96DR7 871 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SENP7Q9BQF6 1050 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 NIF3L1Q9GZT8 377 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 VAV3Q9UKW4 847 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ITGA4P13612 1032 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 RRM1P23921 792 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ALDH5A1P51649 535 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 KIF22Q14807 665 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SGSM1Q2NKQ1 1148 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 FAM193BQ96PV7 902 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SPATC1LQ9H0A9 340 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.57□□□□□ -1.362e-6■■■■□ 19.8
PRKDC-201ENST00000314191 GARTP22102 1010 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 PDIA2Q13087 525 aaKnown RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 COBLL1Q53SF7 1204 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 FAM133BQ5BKY9 247 aaKnown RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ARMCX2Q7L311 632 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 PYROXD1Q8WU10 500 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 C18orf8Q96DM3 657 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CALR3Q96L12 384 aaKnown RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 WDR91A4D1P6 747 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 TBC1D12O60347 775 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 TOM1L1O75674 476 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ADRB2P07550 413 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CA4P22748 312 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SARNPP82979 210 aaKnown RBP6.57□□□□□ -1.36
PRKDC-201ENST00000314191 IL9RQ01113 521 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CCDC38Q502W7 563 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ACAD10Q6JQN1 1059 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 MCEEQ96PE7 176 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 EFCC1Q9HA90 598 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 RASA4BC9J798 803 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 RASA4O43374 803 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CTSHP09668 335 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 RARBP10826 455 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 SDC4P31431 198 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 CYP2C19P33261 490 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 MYL6P60660 151 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 RBP5P82980 135 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ITKQ08881 620 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 HYIQ5T013 277 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 ERP44Q9BS26 406 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 VPS33BQ9H267 617 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 IQCA1LA6NCM1 817 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 PIK3CDO00329 1044 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 HBP1O60381 514 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 GLI1P08151 1106 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 MYBL2P10244 700 aa6.57□□□□□ -1.36
PRKDC-201ENST00000314191 GPAT2Q6NUI2 795 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms