RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ZNF568Q3ZCX4 644 aa24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 TSHZ1Q6ZSZ6 1077 aa24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 ZNF572Q7Z3I7 529 aaPredicted RBP24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 MSL3Q8N5Y2 521 aaKnown RBP24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 EPS8L1Q8TE68 723 aa24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 ZCCHC17Q9NP64 241 aaKnown RBP24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 TSKSQ9UJT2 592 aa24.17■■□□□ 1.46
PDLIM2-202ENST00000308354 OGTO15294 1046 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 CCDC181Q5TID7 509 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 MPZL3Q6UWV2 235 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 BRSK2Q8IWQ3 736 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 VTI1AQ96AJ9 217 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 ZFYVE28Q9HCC9 887 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 PTPRHQ9HD43 1115 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 C1orf112Q9NSG2 853 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 GNEQ9Y223 722 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 HOXD8P13378 290 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 KRT5P13647 590 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 CTGFP29279 349 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 MEI1Q5TIA1 1274 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 SPATA4Q8NEY3 305 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 USP6NLQ92738 828 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 MS4A14Q96JA4 679 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 NOCTQ9UK39 431 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 TLL2Q9Y6L7 1015 aa24.16■■□□□ 1.46
PDLIM2-202ENST00000308354 DCAF8L1A6NGE4 600 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 TNPO2O14787 897 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 HOXC6P09630 235 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 CHRNB2P17787 502 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 PROZP22891 400 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 TMOD1P28289 359 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 PHKA2P46019 1235 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 WDR44Q5JSH3 913 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 TLK2Q86UE8 772 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 TMEM192Q8IY95 271 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 PCDHB18PQ96TA0 734 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 APOBEC3GQ9HC16 384 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 CPSF3Q9UKF6 684 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 L1RE1Q9UN81 338 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 PHACTR2O75167 634 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 ZMYND10O75800 440 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 PAXIP1Q6ZW49 1069 aaPredicted RBP24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 NLRP7Q8WX94 980 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 CPB2Q96IY4 423 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 SCLT1Q96NL6 688 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 GJD2Q9UKL4 321 aa24.15■■□□□ 1.46
PDLIM2-202ENST00000308354 ZNF236Q9UL36 1845 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 TARSL2A2RTX5 802 aaKnown RBP24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 MAP2K7O14733 419 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 MMEP08473 750 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 INHBEP58166 350 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 ITIH3Q06033 890 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 TMEM62Q0P6H9 643 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 MTMR12Q9C0I1 747 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 THAP2Q9H0W7 228 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 OSGEPQ9NPF4 335 aa24.14■■□□□ 1.46
PDLIM2-202ENST00000308354 COL1A2P08123 1366 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 A6NJR5 290 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 CST3P01034 146 aaPredicted RBP24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 CYP11B1P15538 503 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 GCNT1Q02742 428 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 MMGT1Q8N4V1 131 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 ARHGEF26Q96DR7 871 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 CDT1Q9H211 546 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 GINS2Q9Y248 185 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 UMODL1Q5DID0 1318 aa24.14■■□□□ 1.45
PDLIM2-202ENST00000308354 ZC3H11AO75152 810 aaKnown RBP eCLIP24.13■■□□□ 1.45
PDLIM2-202ENST00000308354 PAFAH1B1P43034 410 aa24.13■■□□□ 1.45
PDLIM2-202ENST00000308354 KIAA0319LQ8IZA0 1049 aa24.13■■□□□ 1.45
PDLIM2-202ENST00000308354 LMBR1Q8WVP7 490 aa24.13■■□□□ 1.45
PDLIM2-202ENST00000308354 PRMT7Q9NVM4 692 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-202ENST00000308354 GPR25O00155 361 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 RGS2P41220 211 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 BEX3Q00994 111 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 NCOA4Q13772 614 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 AMHR2Q16671 573 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 HDXQ7Z353 690 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 KAT2BQ92831 832 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 NFKBIZQ9BYH8 718 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 UBXN6Q9BZV1 441 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 FAM49AQ9H0Q0 323 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 INTUQ9ULD6 942 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 ATP8B3O60423 1300 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 FTLP02792 175 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 FGFR4P22455 802 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 LRRC57Q8N9N7 239 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 TPCN2Q8NHX9 752 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 SLC35G2Q8TBE7 412 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 CTNNBL1Q8WYA6 563 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 ARHGAP39Q9C0H5 1083 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 CHORDC1Q9UHD1 332 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 TNFSF13BQ9Y275 285 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 NUB1Q9Y5A7 615 aa24.12■■□□□ 1.45
PDLIM2-202ENST00000308354 PDE6CP51160 858 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 TFAMQ00059 246 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 FMO1Q01740 532 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 CFAP221Q4G0U5 840 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 WDR49Q8IV35 697 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 TMEM130Q8N3G9 435 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 HINFPQ9BQA5 517 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms