RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RRN3P2A6NIE6 340 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 B4GALT5O43286 388 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 MYCP01106 439 aaPredicted RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 H2AFZP0C0S5 128 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 IQCF3P0C7M6 154 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 HARSP12081 509 aaKnown RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 CTGFP29279 349 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 BMP8BP34820 402 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 TNFSF9P41273 254 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 PIK3CAP42336 1068 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 ZNF568Q3ZCX4 644 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 SEZ6Q53EL9 994 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 LMBRD2Q68DH5 695 aaPredicted RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 H2AFVQ71UI9 128 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 RSRC2Q7L4I2 434 aaKnown RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 ZBTB33Q86T24 672 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 EPS8L1Q8TE68 723 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 U2AF1L4Q8WU68 220 aaKnown RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 TATDN2Q93075 761 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 ZNF668Q96K58 619 aaPredicted RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 FAM84AQ96KN4 292 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 FDXACB1Q9BRP7 624 aaPredicted RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 TCHPQ9BT92 498 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 MTMR10Q9NXD2 777 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 HDAC6Q9UBN7 1215 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 NOCTQ9UK39 431 aaKnown RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 AKT3Q9Y243 479 aa12.8□□□□□ -0.36
TRIM40-205ENST00000307859 V9GYY5 206 aaPredicted RBP12.8□□□□□ -0.36
TRIM40-205ENST00000307859 NCANO14594 1321 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 BUB1O43683 1085 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 ZEB2O60315 1214 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 VTNP04004 478 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 PRLRP16471 622 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 TNFAIP3P21580 790 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 ELF2Q15723 593 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 ERCC6LQ2NKX8 1250 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 EEF1DP3Q658K8 133 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 ZNF410Q86VK4 478 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 SLC20A1Q8WUM9 679 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 LMBR1Q8WVP7 490 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 KAT2BQ92831 832 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 MAP7D2Q96T17 732 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 CDT1Q9H211 546 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 SNX12Q9UMY4 172 aa12.79□□□□□ -0.36
TRIM40-205ENST00000307859 NRCAMQ92823 1304 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 A0A0C4DFX4 3053 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 HAS3O00219 553 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 CYP26A1O43174 497 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 TMEM253P0C7T8 217 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 SMIM10L2AP0DMW4 78 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 SMIM10L2BP0DMW5 78 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 CPT1AP50416 773 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 POU5F1Q01860 360 aaKnown RBP12.78□□□□□ -0.36
TRIM40-205ENST00000307859 BIRC3Q13489 604 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 WDR44Q5JSH3 913 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 KIAA0319LQ8IZA0 1049 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 UBXN4Q92575 508 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
TRIM40-205ENST00000307859 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRIM40-205ENST00000307859 BRCA2P51587 3418 aa12.78□□□□□ -0.36
TRIM40-205ENST00000307859 RANBP2P49792 3224 aaKnown RBP12.77□□□□□ -0.36
TRIM40-205ENST00000307859 MBLAC1A4D2B0 266 aaPredicted RBP12.77□□□□□ -0.36
TRIM40-205ENST00000307859 GRID2IPA4D2P6 1211 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 TULP1O00294 542 aaPredicted RBP12.77□□□□□ -0.36
TRIM40-205ENST00000307859 SGPL1O95470 568 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.36
TRIM40-205ENST00000307859 MCF2P10911 925 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 CHRNB2P17787 502 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 GALCP54803 685 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 CHMP4BP1P59074 171 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 ADAM17P78536 824 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 LACTBP83111 547 aaPredicted RBP12.77□□□□□ -0.36
TRIM40-205ENST00000307859 MTFR1Q15390 333 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 IFI16Q16666 785 aaKnown RBP12.77□□□□□ -0.36
TRIM40-205ENST00000307859 LRIT3Q3SXY7 679 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 NOP9Q86U38 636 aaKnown RBP12.77□□□□□ -0.36
TRIM40-205ENST00000307859 PALB2Q86YC2 1186 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 RPUSD2Q8IZ73 545 aaKnown RBP12.77□□□□□ -0.36
TRIM40-205ENST00000307859 GOLGA1Q92805 767 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 PDZD7Q9H5P4 517 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 SETD4Q9NVD3 440 aa12.77□□□□□ -0.36
TRIM40-205ENST00000307859 B4GALT4O60513 344 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 PALMO75781 387 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 CLTAP09496 248 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 CYP11B1P15538 503 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 TCP1P17987 556 aaKnown RBP12.77□□□□□ -0.37
TRIM40-205ENST00000307859 USP8P40818 1118 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 NAP1L1P55209 391 aaKnown RBP12.77□□□□□ -0.37
TRIM40-205ENST00000307859 FCGRTP55899 365 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 TUBB4BP68371 445 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 CKAP4Q07065 602 aaKnown RBP12.77□□□□□ -0.37
TRIM40-205ENST00000307859 NCOA4Q13772 614 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 MFSD10Q14728 455 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
TRIM40-205ENST00000307859 SMYD5Q6GMV2 418 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms