RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 WHRNQ9P202 907 aa14.27□□□□□ -0.13
SEC23A-201ENST00000307712 SEPT9Q9UHD8 586 aaPredicted RBP14.27□□□□□ -0.13
SEC23A-201ENST00000307712 AFDNP55196 1824 aaKnown RBP14.27□□□□□ -0.13
SEC23A-201ENST00000307712 FOXO6A8MYZ6 492 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 CAPN9O14815 690 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 PPEF1O14829 653 aaPredicted RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 RANBP1P43487 201 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 NOP14P78316 857 aaKnown RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 SLC47A2Q86VL8 602 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 ATP11CQ8NB49 1132 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 CCDC124Q96CT7 223 aaKnown RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 NDE1Q9NXR1 346 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 G3BP2Q9UN86 482 aaKnown RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 KRT4P19013 534 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 SLC12A3P55017 1021 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 MTDHQ86UE4 582 aaKnown RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 LINC00116Q8NCU8 138 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 PWWP2AQ96N64 755 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 CENPKQ9BS16 269 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 PAPOLBQ9NRJ5 636 aaKnown RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 KIF3CO14782 793 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 MGRN1O60291 552 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 PSMC4P43686 418 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 POLGP54098 1239 aaPredicted RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 TAF1BQ53T94 588 aaPredicted RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 TRIM42Q8IWZ5 723 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 KCTD6Q8NC69 237 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 MYLK2Q9H1R3 596 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 HEY2Q9UBP5 337 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 P4HBP07237 508 aaKnown RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 VHLP40337 213 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 CRKP46108 304 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 PDE1BQ01064 536 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 RRP1BQ14684 758 aaKnown RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 SNRNP35Q16560 246 aaKnown RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 CRLF3Q8IUI8 442 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 KAT5Q92993 513 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 COA1Q9GZY4 146 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 CHST7Q9NS84 486 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
SEC23A-201ENST00000307712 PCSK1NQ9UHG2 260 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 LRRC37A3O60309 1634 aa14.26□□□□□ -0.13
SEC23A-201ENST00000307712 B2RBV5 119 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 UPP2O95045 317 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 NCF2P19878 526 aaPredicted RBP14.25□□□□□ -0.13
SEC23A-201ENST00000307712 QARSP47897 775 aaKnown RBP14.25□□□□□ -0.13
SEC23A-201ENST00000307712 KLHL38Q2WGJ6 581 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 ZCWPW2Q504Y3 356 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 ZNF720Q7Z2F6 126 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 CKAP2Q8WWK9 683 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 PSMC3IPQ9P2W1 217 aaPredicted RBP14.25□□□□□ -0.13
SEC23A-201ENST00000307712 NXF1Q9UBU9 619 aaKnown RBP14.25□□□□□ -0.13
SEC23A-201ENST00000307712 LMTK3Q96Q04 1460 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 LTN1O94822 1766 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 PPIP5K2O43314 1243 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 TRPA1O75762 1119 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 GNA15P30679 374 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 MAP7D1Q3KQU3 841 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 C11orf63Q6NUN7 778 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 C6orf89Q6UWU4 347 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 POLR3CQ9BUI4 534 aaPredicted RBP14.25□□□□□ -0.13
SEC23A-201ENST00000307712 MOV10L1Q9BXT6 1211 aaKnown RBP14.25□□□□□ -0.13
SEC23A-201ENST00000307712 CYP4F11Q9HBI6 524 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 UBR1Q8IWV7 1749 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 KRT37O76014 449 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 ZCCHC18P0CG32 403 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 KRT10P13645 584 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 PSMA2P25787 234 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 SLC1A1P43005 524 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 THOC5Q13769 683 aaKnown RBP14.25□□□□□ -0.13
SEC23A-201ENST00000307712 SPDYCQ5MJ68 293 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 ARHGEF19Q8IW93 802 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 RASGEF1CQ8N431 466 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 PIP4K2CQ8TBX8 421 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 ACSF2Q96CM8 615 aaPredicted RBP14.25□□□□□ -0.13
SEC23A-201ENST00000307712 DCLRE1BQ9H816 532 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 NINJ2Q9NZG7 142 aa14.25□□□□□ -0.13
SEC23A-201ENST00000307712 MTERF2Q49AM1 385 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 ATG16L1Q676U5 607 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 RGS9BPQ6ZS82 235 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 DHX38Q92620 1227 aaKnown RBP14.24□□□□□ -0.13
SEC23A-201ENST00000307712 ABTB1Q969K4 478 aaPredicted RBP14.24□□□□□ -0.13
SEC23A-201ENST00000307712 TLCD1Q96CP7 247 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 THTPAQ9BU02 230 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 hCG_2014768A0A024R1R8 64 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 GH1P01241 217 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 CALB2P22676 271 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 RRM1P23921 792 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 C3orf62Q6ZUJ4 267 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 GSDMBQ8TAX9 411 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 HSPH1Q92598 858 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 TDRD3Q9H7E2 651 aaKnown RBP14.24□□□□□ -0.13
SEC23A-201ENST00000307712 CYP11B1P15538 503 aa14.24□□□□□ -0.13
SEC23A-201ENST00000307712 CREB1P16220 341 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms