RNA–Protein interactions for RNA: ENST00000307616.1

C11orf40-201, Transcript of chromosome 11 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf40, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf40-201ENST00000307616 RHOUQ7L0Q8 258 aa6.93□□□□□ -1.3
C11orf40-201ENST00000307616 UBE3BQ7Z3V4 1068 aa6.93□□□□□ -1.3
C11orf40-201ENST00000307616 LENG9Q96B70 501 aa6.93□□□□□ -1.3
C11orf40-201ENST00000307616 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
C11orf40-201ENST00000307616 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
C11orf40-201ENST00000307616 TDP1Q9NUW8 608 aa6.93□□□□□ -1.3
C11orf40-201ENST00000307616 FBXO34Q9NWN3 711 aa6.93□□□□□ -1.3
C11orf40-201ENST00000307616 SPEF1Q9Y4P9 236 aa6.93□□□□□ -1.3
C11orf40-201ENST00000307616 RNASET2O00584 256 aaKnown RBP6.92□□□□□ -1.3
C11orf40-201ENST00000307616 ITGB1P05556 798 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 LAG3P18627 525 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 SLC6A2P23975 617 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 ANAPC15P60006 121 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 UAP1L1Q3KQV9 507 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 TIGD2Q4W5G0 525 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 LRRC55Q6ZSA7 311 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 ZNF627Q7L945 461 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 RSPH3Q86UC2 560 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 PLXDC1Q8IUK5 500 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 PROKR1Q8TCW9 393 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 TMX3Q96JJ7 454 aa6.92□□□□□ -1.3
C11orf40-201ENST00000307616 TCRBV7S2A1N4TA0A589 114 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 LPXNO60711 386 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 NDUFA10O95299 355 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 ABHD16AO95870 558 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 SPATA31D3P0C874 917 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 CDC42EP1Q00587 391 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 AGAP9Q5VTM2 703 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 TSHZ3Q63HK5 1081 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 KCNV1Q6PIU1 500 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 SPATA31D4Q6ZUB0 917 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 RHOT2Q8IXI1 618 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 DCBLD1Q8N8Z6 715 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 KAT5Q92993 513 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 MRIQ9BWK5 157 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 MAP3K2Q9Y2U5 619 aa6.91□□□□□ -1.3
C11orf40-201ENST00000307616 GAGE12BA1L429 117 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 KIAA0391O15091 583 aaKnown RBP6.9□□□□□ -1.3
C11orf40-201ENST00000307616 PRSS23O95084 383 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 ZRANB2O95218 330 aaKnown RBP eCLIP6.9□□□□□ -1.3
C11orf40-201ENST00000307616 ADKP55263 362 aaKnown RBP6.9□□□□□ -1.3
C11orf40-201ENST00000307616 CTXN1P60606 82 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 EXOSC10Q01780 885 aaKnown RBP6.9□□□□□ -1.3
C11orf40-201ENST00000307616 CREMQ03060 361 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 BEAN1Q3B7T3 259 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 OR56A1Q8NGH5 318 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 MYEOVQ96EZ4 313 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 C11orf54Q9H0W9 315 aaPredicted RBP6.9□□□□□ -1.3
C11orf40-201ENST00000307616 KLHL11Q9NVR0 708 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 ATP11BQ9Y2G3 1177 aa6.9□□□□□ -1.3
C11orf40-201ENST00000307616 CENPVL1A0A0U1RR11 272 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 SNUPNO95149 360 aaKnown RBP6.89□□□□□ -1.31
C11orf40-201ENST00000307616 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
C11orf40-201ENST00000307616 HMGA2P52926 109 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 LY6G5CQ5SRR4 150 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 ZBTB46Q86UZ6 589 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
C11orf40-201ENST00000307616 IFI44Q8TCB0 444 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 REXO4Q9GZR2 422 aaKnown RBP6.89□□□□□ -1.31
C11orf40-201ENST00000307616 GSTO2Q9H4Y5 243 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 ANKFY1Q9P2R3 1169 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 PCDHB1Q9Y5F3 818 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 HS3ST4Q9Y661 456 aa6.89□□□□□ -1.31
C11orf40-201ENST00000307616 CDHR4A6H8M9 788 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 TMEM200CA6NKL6 621 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 SGTAO43765 313 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 ZNF280AP59817 542 aaPredicted RBP6.88□□□□□ -1.31
C11orf40-201ENST00000307616 IGBP1P78318 339 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 ATP2B3Q16720 1220 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 Q6ZPA2 131 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 VRK3Q8IV63 474 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 ULK2Q8IYT8 1036 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 MIER2Q8N344 545 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 AMER2Q8N7J2 671 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 CLPTM1LQ96KA5 538 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 ZSWIM1Q9BR11 485 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.88□□□□□ -1.31
C11orf40-201ENST00000307616 FPGT-TNNI3KV9GXZ4 949 aa6.88□□□□□ -1.31
C11orf40-201ENST00000307616 AATKQ6ZMQ8 1374 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 UNC119BA6NIH7 251 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 ELANEP08246 267 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 ALAS1P13196 640 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 GCSHP23434 173 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 NEK2P51955 445 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 PTPAQ15257 358 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 DACT2Q5SW24 774 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 PPP4R3AQ6IN85 833 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 LDLRAD3Q86YD5 345 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 MAPKAPK5Q8IW41 473 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 CMTR2Q8IYT2 770 aaKnown RBP6.87□□□□□ -1.31
C11orf40-201ENST00000307616 MRGPRX4Q96LA9 322 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 DKK2Q9UBU2 259 aa6.87□□□□□ -1.31
C11orf40-201ENST00000307616 LUC7L2Q9Y383 392 aaKnown RBP6.87□□□□□ -1.31
C11orf40-201ENST00000307616 SHROOM4Q9ULL8 1493 aa6.86□□□□□ -1.31
C11orf40-201ENST00000307616 A0A1B0GTW7 788 aa6.86□□□□□ -1.31
C11orf40-201ENST00000307616 CCDC78A2IDD5 438 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms