RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SMTNL2Q2TAL5 461 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 BBS9Q3SYG4 887 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 CDR2LQ86X02 465 aaPredicted RBP15.53■□□□□ 0.08
PTPN9-201ENST00000306726 RMDN2Q96LZ7 410 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 STMN4Q9H169 189 aaPredicted RBP15.53■□□□□ 0.08
PTPN9-201ENST00000306726 SYNCQ9H7C4 482 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 LARSQ9P2J5 1176 aaKnown RBP15.53■□□□□ 0.08
PTPN9-201ENST00000306726 SYNPO2Q9UMS6 1093 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 G3BP2Q9UN86 482 aaKnown RBP15.53■□□□□ 0.08
PTPN9-201ENST00000306726 C2orf71A6NGG8 1288 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 SMIM24O75264 130 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 RALAP11233 206 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 PLS3P13797 630 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 SHMT1P34896 483 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 ACOT2P49753 483 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 ADCY2Q08462 1091 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 LRIG3Q6UXM1 1119 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 EXOC3L1Q86VI1 746 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 ZWILCHQ9H900 591 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.53■□□□□ 0.081e-8■■■■□ 23.1
PTPN9-201ENST00000306726 NOP53Q9NZM5 478 aaKnown RBP15.53■□□□□ 0.08
PTPN9-201ENST00000306726 RPA1P27694 616 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 ERMARDQ5T6L9 678 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 PPP1R21Q6ZMI0 780 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 ZBED8Q8IZ13 594 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 SYT2Q8N9I0 419 aaPredicted RBP15.53■□□□□ 0.08
PTPN9-201ENST00000306726 TTC17Q96AE7 1141 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 MCUR1Q96AQ8 359 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 POLR2MP0CAP2 368 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 COILP38432 576 aaPredicted RBP15.52■□□□□ 0.08
PTPN9-201ENST00000306726 ITIH3Q06033 890 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 BFSP1Q12934 665 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 LRRC8CQ8TDW0 803 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 NUDCD1Q96RS6 583 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 MKNK1Q9BUB5 465 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 PGAP2Q9UHJ9 254 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 H0YGN5 161 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 PHF2O75151 1096 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 EIF3BP55884 814 aaKnown RBP15.52■□□□□ 0.08
PTPN9-201ENST00000306726 GABPAQ06546 454 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 PPP2R5DQ14738 602 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 SGSM1Q2NKQ1 1148 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 CYP4X1Q8N118 509 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 UBN1Q9NPG3 1134 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 NFS1Q9Y697 457 aa15.52■□□□□ 0.08
PTPN9-201ENST00000306726 PFASO15067 1338 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 LRRD1A4D1F6 860 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 CCDC160A6NGH7 325 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 IPO5O00410 1097 aaKnown RBP15.52■□□□□ 0.07
PTPN9-201ENST00000306726 RIPK2O43353 540 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 RASSF9O75901 435 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 PTENP60484 403 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 DRP2Q13474 957 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 AUHQ13825 339 aaKnown RBP15.52■□□□□ 0.07
PTPN9-201ENST00000306726 EDRF1Q3B7T1 1238 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 IZUMO3Q5VZ72 239 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 CAPRIN2Q6IMN6 1127 aaKnown RBP15.52■□□□□ 0.07
PTPN9-201ENST00000306726 SULF1Q8IWU6 871 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 PCSK1NQ9UHG2 260 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 IKBKGQ9Y6K9 419 aa15.52■□□□□ 0.07
PTPN9-201ENST00000306726 MEIS2O14770 477 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 NQO1P15559 274 aaKnown RBP15.51■□□□□ 0.07
PTPN9-201ENST00000306726 GPS1Q13098 491 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 P3H1Q32P28 736 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 AGBL2Q5U5Z8 902 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 WDR78Q5VTH9 848 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 EEPD1Q7L9B9 569 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 NOP9Q86U38 636 aaKnown RBP15.51■□□□□ 0.07
PTPN9-201ENST00000306726 CCT6BQ92526 530 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 MIEF2Q96C03 454 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 PCDHB18PQ96TA0 734 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 PLVAPQ9BX97 442 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 RRM1P23921 792 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 NSFP46459 744 aaKnown RBP15.51■□□□□ 0.07
PTPN9-201ENST00000306726 TMEM270Q6UE05 265 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 AGBL1Q96MI9 1066 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 R3HDM2Q9Y2K5 976 aaKnown RBP15.51■□□□□ 0.07
PTPN9-201ENST00000306726 TXNDC9O14530 226 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 ENTPD5O75356 428 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 LCA5LO95447 670 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 SAMD7Q7Z3H4 446 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 SLC13A5Q86YT5 568 aaPredicted RBP15.51■□□□□ 0.07
PTPN9-201ENST00000306726 TAS1R2Q8TE23 839 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 USH1CQ9Y6N9 552 aa15.51■□□□□ 0.07
PTPN9-201ENST00000306726 PIK3CAP42336 1068 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 SARNPP82979 210 aaKnown RBP15.5■□□□□ 0.07
PTPN9-201ENST00000306726 MAP3K10Q02779 954 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 PREPLQ4J6C6 727 aaPredicted RBP15.5■□□□□ 0.07
PTPN9-201ENST00000306726 KCNT1Q5JUK3 1230 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 FMNL3Q8IVF7 1028 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 RBM15Q96T37 977 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPN9-201ENST00000306726 ZSWIM1Q9BR11 485 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 WDR11Q9BZH6 1224 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPN9-201ENST00000306726 CNTNAP1P78357 1384 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 SLITRK3O94933 977 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 TMEM253P0C7T8 217 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 EPHB2P29323 1055 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 PPP2R5CQ13362 524 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms