RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 ZSWIM2Q8NEG5 633 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 CMASQ8NFW8 434 aaPredicted RBP12.32□□□□□ -0.44
CLCC1-201ENST00000302500 CXorf38Q8TB03 319 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 CASP10Q92851 521 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 C18orf25Q96B23 403 aaPredicted RBP12.32□□□□□ -0.44
CLCC1-201ENST00000302500 COLEC11Q9BWP8 271 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 PHF7Q9BWX1 381 aaPredicted RBP12.32□□□□□ -0.44
CLCC1-201ENST00000302500 POMKQ9H5K3 350 aa12.32□□□□□ -0.44
CLCC1-201ENST00000302500 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 MUC6Q6W4X9 2439 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 CUTAO60888 179 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 N4BP1O75113 896 aaKnown RBP12.31□□□□□ -0.44
CLCC1-201ENST00000302500 CXCL8P10145 99 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 LRPAP1P30533 357 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 OSTNP61366 133 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 DHX8Q14562 1220 aaKnown RBP12.31□□□□□ -0.44
CLCC1-201ENST00000302500 USP41Q3LFD5 358 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 HERC4Q5GLZ8 1057 aaPredicted RBP12.31□□□□□ -0.44
CLCC1-201ENST00000302500 RRAGBQ5VZM2 374 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 KIAA1841Q6NSI8 718 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 EPM2AIP1Q7L775 607 aaPredicted RBP12.31□□□□□ -0.44
CLCC1-201ENST00000302500 DYMQ7RTS9 669 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 ZBTB33Q86T24 672 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 MYCT1Q8N699 235 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 C12orf76Q8N812 135 aaPredicted RBP12.31□□□□□ -0.44
CLCC1-201ENST00000302500 HASPINQ8TF76 798 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 DDX27Q96GQ7 796 aaKnown RBP12.31□□□□□ -0.44
CLCC1-201ENST00000302500 FBXL18Q96ME1 805 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 FAM193BQ96PV7 902 aaPredicted RBP12.31□□□□□ -0.44
CLCC1-201ENST00000302500 TRIM9Q9C026 710 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 MRPL17Q9NRX2 175 aaKnown RBP12.31□□□□□ -0.44
CLCC1-201ENST00000302500 SEL1LQ9UBV2 794 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 TUBGCP4Q9UGJ1 667 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 HPSEQ9Y251 543 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 SF3B1O75533 1304 aaKnown RBP eCLIP12.31□□□□□ -0.444e-15■■■■■ 68.9
CLCC1-201ENST00000302500 ZDBF2Q9HCK1 2354 aa12.31□□□□□ -0.44
CLCC1-201ENST00000302500 H0YCG3 227 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 K7ENM7 598 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 OGTO15294 1046 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 CLDN3O15551 220 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 TGM5O43548 720 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 FAM13AO94988 1023 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 URODP06132 367 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 ITIH3Q06033 890 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 STK38Q15208 465 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 FOXD4L5Q5VV16 416 aaPredicted RBP12.3□□□□□ -0.44
CLCC1-201ENST00000302500 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 DCLRE1AQ6PJP8 1040 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 PRSS55Q6UWB4 352 aaPredicted RBP12.3□□□□□ -0.44
CLCC1-201ENST00000302500 CCDC73Q6ZRK6 1079 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 GPR149Q86SP6 731 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 FOXD4L4Q8WXT5 416 aaPredicted RBP12.3□□□□□ -0.44
CLCC1-201ENST00000302500 HVCN1Q96D96 273 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 UROC1Q96N76 676 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 ACAP3Q96P50 834 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
CLCC1-201ENST00000302500 PLEKHA5Q9HAU0 1116 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 DZANK1Q9NVP4 752 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 ANKFY1Q9P2R3 1169 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 MTRRQ9UBK8 725 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 FBXW11Q9UKB1 542 aa12.3□□□□□ -0.44
CLCC1-201ENST00000302500 VPS13AQ96RL7 3174 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 ANO9A1A5B4 782 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 PPEF2O14830 753 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 HNRNPDLO14979 420 aaKnown RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 ACTN4O43707 911 aaKnown RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 GPR37L1O60883 481 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 VNN2O95498 520 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 CLTAP09496 248 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 MYBP10242 640 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 RPL17P18621 184 aaKnown RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 CYP3A5P20815 502 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 BRCC3P46736 316 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 STRN3Q13033 797 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 L1TD1Q5T7N2 865 aaKnown RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 SLC8B1Q6J4K2 584 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 POTEHQ6S545 545 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 C15orf39Q6ZRI6 1047 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 EP400NLQ6ZTU2 488 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 SV2BQ7L1I2 683 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 PPFIBP1Q86W92 1011 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 RNF135Q8IUD6 432 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 KCNG4Q8TDN1 519 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 LEO1Q8WVC0 666 aaPredicted RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 HPS3Q969F9 1004 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 C7orf25Q9BPX7 421 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 TTPALQ9BTX7 342 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 PANK2Q9BZ23 570 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 GZF1Q9H116 711 aaPredicted RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 CUEDC2Q9H467 287 aa12.29□□□□□ -0.44
CLCC1-201ENST00000302500 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 TOPORSQ9NS56 1045 aaPredicted RBP12.29□□□□□ -0.44
CLCC1-201ENST00000302500 FAM50BQ9Y247 325 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms