RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 PFDN4Q9NQP4 134 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 ARMCX1Q9P291 453 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 H3BRJ5 948 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 CREB3O43889 395 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 SEC24DO94855 1032 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-201ENST00000301981 KRT4P19013 534 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 PBX1P40424 430 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 SESN2P58004 480 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-201ENST00000301981 TMEM62Q0P6H9 643 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 AMHR2Q16671 573 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 ADPGKQ9BRR6 497 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 TRIM55Q9BYV6 548 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 AGPAT3Q9NRZ7 376 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 MEI4A8MW99 385 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 TULP2O00295 520 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 ATP13A4Q4VNC1 1196 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 LRP10Q7Z4F1 713 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 TMC3Q7Z5M5 1100 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 NIM1KQ8IY84 436 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 ARHGAP24Q8N264 748 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 FAM71DQ8N9W8 422 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 ATP8B4Q8TF62 1192 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 SGSM3Q96HU1 749 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-201ENST00000301981 FAM49AQ9H0Q0 323 aaPredicted RBP8.17□□□□□ -1.1
LRRC28-201ENST00000301981 PCMTD2Q9NV79 361 aa8.17□□□□□ -1.1
LRRC28-201ENST00000301981 TCRBV7S2A1N4TA0A589 114 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 RTN2O75298 545 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 RAP1GAPP47736 663 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 RCAN1P53805 252 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 PSMC1P62191 440 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 SPP2Q13103 211 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 LGSNQ5TDP6 509 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 CEP41Q9BYV8 373 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 CHST7Q9NS84 486 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 GPATCH2LQ9NWQ4 482 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 ARL2BPQ9Y2Y0 163 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 TECPR2O15040 1411 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 ZBED1O96006 694 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 SETSIPP0DME0 302 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 MAGEA4P43358 317 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 MAPK7Q13164 816 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 SBK1Q52WX2 424 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 C3orf62Q6ZUJ4 267 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 TMEM179Q6ZVK1 233 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 MTDHQ86UE4 582 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 PDIK1LQ8N165 341 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 ACAP3Q96P50 834 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 BBOX1O75936 387 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 RRM1P23921 792 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 THOC5Q13769 683 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 SEPT6Q14141 434 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 KRT39Q6A163 491 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 FAM43BQ6ZT52 329 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 GALNT4Q8N4A0 578 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 MMTAG2Q9BU76 263 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 ACSS2Q9NR19 701 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 SLC9A2Q9UBY0 812 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 A6NJR5 290 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 PPP1R12AO14974 1030 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 APRTP07741 180 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 NQO1P15559 274 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 CHKAP35790 457 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 PGM1P36871 562 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 FXR2P51116 673 aaKnown RBP eCLIP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 COPS2P61201 443 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 CEP55Q53EZ4 464 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 TAF1BQ53T94 588 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 MROH9Q5TGP6 573 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 CLEC4GQ6UXB4 293 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 PALB2Q86YC2 1186 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 LRRC71Q8N4P6 559 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 EMC1Q8N766 993 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 FAM111AQ96PZ2 611 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 M0QYV0 167 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 TJP3O95049 919 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 GH1P01241 217 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 QARSP47897 775 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 GABPAQ06546 454 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 ITGB3BPQ13352 177 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 CYTH1Q15438 398 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 SNRNP48Q6IEG0 339 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 TRMT10CQ7L0Y3 403 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 HACE1Q8IYU2 909 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 FBXL13Q8NEE6 735 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 TAS1R2Q8TE23 839 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 PABPC3Q9H361 631 aaKnown RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 RBAKQ9NYW8 714 aaPredicted RBP8.16□□□□□ -1.1
LRRC28-201ENST00000301981 PHTF1Q9UMS5 762 aa8.16□□□□□ -1.1
LRRC28-201ENST00000301981 ZBBXA8MT70 800 aa8.15□□□□□ -1.1
LRRC28-201ENST00000301981 PRPSAP2O60256 369 aa8.15□□□□□ -1.1
LRRC28-201ENST00000301981 LUC7L3O95232 432 aaKnown RBP8.15□□□□□ -1.1
LRRC28-201ENST00000301981 CREB1P16220 341 aa8.15□□□□□ -1.1
LRRC28-201ENST00000301981 EPHB2P29323 1055 aa8.15□□□□□ -1.1
LRRC28-201ENST00000301981 ALDH5A1P51649 535 aaPredicted RBP8.15□□□□□ -1.1
LRRC28-201ENST00000301981 PSMC5P62195 406 aa8.15□□□□□ -1.1
LRRC28-201ENST00000301981 BMPR2Q13873 1038 aa8.15□□□□□ -1.1
LRRC28-201ENST00000301981 C11orf63Q6NUN7 778 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms