RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 KLHL38Q2WGJ6 581 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 SGMS1Q86VZ5 419 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 PABPC5Q96DU9 382 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 SERPINI1Q99574 410 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 AIPL1Q9NZN9 384 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 KLK14Q9P0G3 267 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 SLC25A13Q9UJS0 675 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 AP3B1O00203 1094 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 PDXKO00764 312 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 NKRFO15226 690 aaKnown RBP eCLIP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 AMHP03971 560 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 MBL2P11226 248 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 RPS6P62753 249 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 ACAD11Q709F0 780 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 CHSY1Q86X52 802 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 USP33Q8TEY7 942 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 L3MBTL3Q96JM7 780 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 SPATA16Q9BXB7 569 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 MRPL46Q9H2W6 279 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.31□□□□□ -1.244e-14■■■□□ 16.5
GAPVD1-202ENST00000297933 SLC30A1Q9Y6M5 507 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 CCDC85CA6NKD9 419 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 CYP26A1O43174 497 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 MFAP3LO75121 409 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 ACADMP11310 421 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 TWF1Q12792 350 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 LAMB3Q13751 1172 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 INTS5Q6P9B9 1019 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 FBXO16Q8IX29 292 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 GUF1Q8N442 669 aaKnown RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 CCDC197Q8NCU1 140 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 MORC4Q8TE76 937 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 ZNF512BQ96KM6 892 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 RIT2Q99578 217 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 KDM4CQ9H3R0 1056 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 MFSD1Q9H3U5 465 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 HMX1Q9NP08 348 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 SELENONQ9NZV5 590 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 WDR35Q9P2L0 1181 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 TEKT2Q9UIF3 430 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 TTC7AQ9ULT0 858 aaPredicted RBP7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 PCDHGB4Q9UN71 923 aa7.31□□□□□ -1.24
GAPVD1-202ENST00000297933 ABCA9Q8IUA7 1624 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 C3orf70A6NLC5 250 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 SPECC1L-ADORA2AF8WAN1 911 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 GAS2O43903 313 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 EPHB3P54753 998 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 ATP2C1P98194 919 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 CAV1Q03135 178 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 GOLGA7BQ2TAP0 167 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 USP50Q70EL3 339 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 CCNYL1Q8N7R7 359 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 ATP6V0D2Q8N8Y2 350 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 RDM1Q8NG50 284 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 FBXO41Q8TF61 875 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 TTC17Q96AE7 1141 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 CCDC138Q96M89 665 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 TUBB6Q9BUF5 446 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 WNT8AQ9H1J5 351 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 POLLQ9UGP5 575 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 TUBE1Q9UJT0 475 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 CCDC188H7C350 402 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 TRPA1O75762 1119 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 PRR29P0C7W0 189 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 SLC11A2P49281 568 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 TMPRSS15P98073 1019 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 TMC7Q7Z402 723 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 SPATS2Q86XZ4 545 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 TRIM59Q8IWR1 403 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 GPC2Q8N158 579 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 SOCS4Q8WXH5 440 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 UNC45AQ9H3U1 944 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 MED4Q9NPJ6 270 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 KCNH7Q9NS40 1196 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 FAM49BQ9NUQ9 324 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 NRBP1Q9UHY1 535 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 UBQLN1Q9UMX0 589 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 PDS5AQ29RF7 1337 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 SPDYE5A6NIY4 337 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 CLTAP09496 248 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 FAM200BP0CF97 657 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 ACTR2P61160 394 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 GPS1Q13098 491 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 SNRNP35Q16560 246 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 SPDYE7PQ495Y7 208 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 C6orf118Q5T5N4 469 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 NBPF12Q5TAG4 269 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 ZC3H18Q86VM9 953 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 MTG1Q9BT17 334 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 GLIS2Q9BZE0 524 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 UPF3AQ9H1J1 476 aaKnown RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 JMJD4Q9H9V9 463 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 MSRAQ9UJ68 235 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 NEXMIFQ5QGS0 1516 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 A0A1B0GUA9 196 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 TLR2O60603 784 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 PDGFRAP16234 1089 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 CHRNA3P32297 505 aa7.3□□□□□ -1.24
GAPVD1-202ENST00000297933 ADCY2Q08462 1091 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms