RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 FIGNQ5HY92 759 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 PHLDB3Q6NSJ2 640 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 WDR49Q8IV35 697 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 LMO3Q8TAP4 145 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 BAP1Q92560 729 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 KAT5Q92993 513 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 ANKRD36BP1Q96IX9 119 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 ERVK-5Q9HDB9 667 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 IPPQ9Y573 584 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 MGEA5O60502 916 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 RECQL4O94761 1208 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 MSNP26038 577 aaKnown RBP12.29□□□□□ -0.44
XRCC4-201ENST00000282268 USP8P40818 1118 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 GJA8P48165 433 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 CLDN10P78369 228 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 TRPC3Q13507 836 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 MTF1Q14872 753 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 TMEM132DQ14C87 1099 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 ZACNQ401N2 412 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 WDR44Q5JSH3 913 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 FAM26DQ5JW98 314 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 GLRA4Q5JXX5 417 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 SFMBT2Q5VUG0 894 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 LRRC8DQ7L1W4 858 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 TRAPPC11Q7Z392 1133 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 ZSCAN30Q86W11 494 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 PPM1KQ8N3J5 372 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 CCDC112Q8NEF3 446 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 TATDN2Q93075 761 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 IQCDQ96DY2 449 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 CCDC51Q96ER9 411 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 PAWRQ96IZ0 340 aaKnown RBP12.29□□□□□ -0.44
XRCC4-201ENST00000282268 CHP1Q99653 195 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 PPP1R12CQ9BZL4 782 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 APEX2Q9UBZ4 518 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 PCDHB2Q9Y5E7 798 aa12.29□□□□□ -0.44
XRCC4-201ENST00000282268 UMODL1Q5DID0 1318 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 DCDC2CA8MYV0 355 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 CST3P01034 146 aaPredicted RBP12.28□□□□□ -0.44
XRCC4-201ENST00000282268 CD4P01730 458 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 SELPP16109 830 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 CCL23P55773 120 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 TLE2Q04725 743 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 ENPEPQ07075 957 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 BFSP2Q13515 415 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 NCOA4Q13772 614 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 DRAP1Q14919 205 aaPredicted RBP12.28□□□□□ -0.44
XRCC4-201ENST00000282268 ASIC2Q16515 512 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 E4F1Q66K89 784 aaPredicted RBP12.28□□□□□ -0.44
XRCC4-201ENST00000282268 C15orf39Q6ZRI6 1047 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 SMG8Q8ND04 991 aaKnown RBP12.28□□□□□ -0.44
XRCC4-201ENST00000282268 LPPQ93052 612 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 NT5C1BQ96P26 610 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 MCOLN1Q9GZU1 580 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 TMX1Q9H3N1 280 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 C11orf49Q9H6J7 331 aa12.28□□□□□ -0.44
XRCC4-201ENST00000282268 MEIS3P2A8K0S8 358 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 ESPNB1AK53 854 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 CAND2O75155 1236 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 GFPT2O94808 682 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 PLEKP08567 350 aaPredicted RBP12.27□□□□□ -0.45
XRCC4-201ENST00000282268 ITGA4P13612 1032 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 MCCD1P59942 119 aaPredicted RBP12.27□□□□□ -0.45
XRCC4-201ENST00000282268 MYL6P60660 151 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 MBTPS1Q14703 1052 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 TDRD12Q587J7 1177 aaKnown RBP12.27□□□□□ -0.45
XRCC4-201ENST00000282268 WDR59Q6PJI9 974 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 TRAF7Q6Q0C0 670 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 CYP26C1Q6V0L0 522 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 RAD9BQ6WBX8 426 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 CAGE1Q8TC20 777 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 C18orf25Q96B23 403 aaPredicted RBP12.27□□□□□ -0.45
XRCC4-201ENST00000282268 SCLYQ96I15 445 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 SNX27Q96L92 541 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 ADAM2Q99965 735 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 DESI2Q9BSY9 194 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 EDEM3Q9BZQ6 932 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 C1orf112Q9NSG2 853 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 FAM105AQ9NUU6 356 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 TRMT1Q9NXH9 659 aaKnown RBP12.27□□□□□ -0.45
XRCC4-201ENST00000282268 PCDH10Q9P2E7 1040 aa12.27□□□□□ -0.45
XRCC4-201ENST00000282268 FAM170AA1A519 330 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 PMM2O15305 246 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 ITGB3P05106 788 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 AP3M2P53677 418 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 SCARA5Q6ZMJ2 495 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 TOGARAM2Q6ZUX3 1019 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 ZMAT2Q96NC0 199 aaKnown RBP12.26□□□□□ -0.45
XRCC4-201ENST00000282268 NAA15Q9BXJ9 866 aaKnown RBP12.26□□□□□ -0.45
XRCC4-201ENST00000282268 SEZ6LQ9BYH1 1024 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 STK33Q9BYT3 514 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 IFIH1Q9BYX4 1025 aaKnown RBP12.26□□□□□ -0.45
XRCC4-201ENST00000282268 HIPK3Q9H422 1215 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 ASB7Q9H672 318 aa12.26□□□□□ -0.45
XRCC4-201ENST00000282268 CHST12Q9NRB3 414 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms